| Literature DB >> 34255646 |
Julia Höhn1, Achim Hekler1, Eva Krieghoff-Henning1, Jakob Nikolas Kather2,3, Jochen Sven Utikal4,5, Friedegund Meier6, Frank Friedrich Gellrich6, Axel Hauschild7, Lars French8, Justin Gabriel Schlager8, Kamran Ghoreschi9, Tabea Wilhelm9, Heinz Kutzner10, Markus Heppt11, Sebastian Haferkamp12, Wiebke Sondermann13, Dirk Schadendorf13, Bastian Schilling14, Roman C Maron1, Max Schmitt1, Tanja Jutzi1, Stefan Fröhling3,15, Daniel B Lipka3,15,16, Titus Josef Brinker1.
Abstract
BACKGROUND: Recent years have been witnessing a substantial improvement in the accuracy of skin cancer classification using convolutional neural networks (CNNs). CNNs perform on par with or better than dermatologists with respect to the classification tasks of single images. However, in clinical practice, dermatologists also use other patient data beyond the visual aspects present in a digitized image, further increasing their diagnostic accuracy. Several pilot studies have recently investigated the effects of integrating different subtypes of patient data into CNN-based skin cancer classifiers.Entities:
Keywords: convolutional neural networks; patient data; skin cancer classification
Year: 2021 PMID: 34255646 PMCID: PMC8285747 DOI: 10.2196/20708
Source DB: PubMed Journal: J Med Internet Res ISSN: 1438-8871 Impact factor: 5.428
Figure 1An overview of patient data considered by dermatologists while diagnosing skin lesions. The framed characteristics in the figure illustrate the fraction of patient data that can potentially be recognized by convolutional neural networks from a single image input. UVR: ultraviolet radiation.
Summary table.
| Study | Patient data types | Result (without/with) | Classification task | CNNa architecture | Data set | Samples, n |
| Bonechi et al [ | 4 types: age, sex, location, and presence of melanocytic cells | Accuracy: 0.8344/0.8834 | Binary: benign or malignant (MELb, BCCc, SCCd) | ResNet50 | ISICe | 5405 |
| Chin et al [ | 5 types: age; sex; size; how long it existed; changes in size, color, or shape including bleeding and itching | Accuracy: 0.84/0.92 | Binary: low risk or high risk for MEL | DenseNet121 | Own | 5289 |
| Gonzalez-Diaz [ | 2 types: age and sex | Accuracy: 0.848/0.859 | Binary: MEL yes or no | ResNet50 | 2017 ISBIf challenge+interactive atlas of dermoscopy [ | 6302 |
| Gessert et al [ | 3 types: age, sex, and location | Sensitivity: 0.725/0.742; specificity: data not available | 8 classes: MEL, NVg, BCC, AKh, BKLi, DFj, VASCk, SCC | EfficientNets | ISIC (HAM10000 [ | 27,665 |
| Kawahara et al [ | 3 types: sex, location, and elevation | Sensitivity: 0.527/0.604; specificity: 0.902/0.910 | 5 classes: MEL, BCC, NV, MISCl, SKm | Inception V3 | 7-point data set | 808 |
| Kharazmi et al [ | 5 types: age, sex, location, size, and elevation | Accuracy: 0.847/0.911 | Binary: BCC yes or no | Convolutional filters of learned kernel weights from a sparse autoencoder | Own | 1199 |
| Li et al [ | 3 types: age, sex, and location | Sensitivity: 0.8544/0.8764; specificity: data not available | 7 classes: NV, MEL, BKL, BCC, AKIECn, VASC, DF | SENet154 | ISIC 2018 data set | 10,015 |
| Pacheco and Krohling [ | 8 types: age, location, lesion itches, bleeds or has bled, pain, recently increased, changed its pattern, and elevation | Accuracy: 0.671/0.788 | 6 Classes: BCC, SCC, AK, SK, MEL, NV | ResNet50 | Own | 1612 |
| Ruiz-Castilla et al [ | 3 types: age, sex, and size | Accuracy: 0.61/0.85 | Binary: MEL yes or no | Shallow network with 2 convolutional layers | ISIC | 300 |
| Sriwong et al [ | 3 types: age, sex, and location | Accuracy: 0.7929/0.8039 | 7 classes: AKIEC, BCC, BKL, DF, MEL, NV, VASC | AlexNet | HAM10000 | 16,720 |
| Yap et al [ | 3 types: age, sex, and location | Mean average precision: 0.726/0.729; Accuracy: 0.721/0.720 | 5 classes: BCC, SCC, MEL, BKL, NV | ResNet50 | ILSVRCo 2015 [ | 2917 (only testing) |
aCNN: convolutional neural network (most of the studies had the goal of investigating the usefulness of the presented fusion technique independently of the convolutional neural network architecture and, therefore, often showed the performance of the fusion with multiple architectures; we included only the best-performing architecture).
bMEL: melanoma.
cBCC: basal cell carcinoma.
dSCC: squamous cell carcinoma.
eISIC: International Skin Imaging Collaboration.
fISBI: International Symposium on Biomedical Imaging [49].
gNV: melanocytic nevus.
hAK: actinic keratosis.
iBKL: benign keratosis-like lesion.
jDF: dermatofibroma.
kVASC: vascular lesion.
lMISC: summary of dermatofibroma, lentigo, melanosis, miscellaneous, and vascular lesion.
mSK: seborrheic keratosis.
nAKIEC: actinic keratosis and intraepithelial carcinoma.
oILSVRC: ImageNet Large Scale Visual Recognition Challenge.
Figure 2Overview of the different fusing techniques in the main function blocks of the combined classifier. CNN: convolutional neural network.
Influence of included patient data on the classification performance of the single skin diseases or lesionsa.
| Study, patient data, and metric | Skin disease | |||||||||||
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| MELb | NVc | BCCd | SCCe | AKf | AKIECg | BKLh | DFi | VASCj | MISCk | SKl | |
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| AUCm | +n | (+/−)o | −p | − | + | Xq | + | + | − | X | X |
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| Sensitivity | − | − | − | − | − | X | − | − | − | X | X |
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| Specificity | + | + | + | + | + | X | + | + | + | X | X |
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| Sensitivity | + | − | + | X | X | − | + | + | − | X | X |
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| Specificity | − | + | − | X | X | + | + | +/− | + | X | X |
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| Sensitivity | − | − | + | X | X | − | + | + | + | X | X |
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| Sensitivity | + | + | + | X | X | X | X | X | X | + | + |
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| Specificity | + | + | +/− | X | X | X | X | X | X | + | + |
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| Sensitivity | + | + | + | + | + | X | X | X | X | X | + |
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| Specificity | + | + | + | − | + | X | X | X | X | X | + |
aThe study of Yap et al [56] is excluded because the confusion matrix was not legible. It must be noticed that there are some combinations where the outcome deteriorates by including patient data.
bMEL: melanoma.
cNV: Melanocytic nevus.
dBCC: basal cell carcinoma.
eSCC: squamous cell carcinoma.
fAK: Actinic keratosis.
gAKIEC: actinic keratosis and intraepithelial carcinoma.
hBKL: benign keratosis-like lesion.
iDF: dermatofibroma.
jVASC: vascular lesion.
kMISC: miscellaneous and vascular lesion.
lSK: seborrheic keratosis.
mAUC: area under the curve.
nIndicates improvement compared with classification performance without patient data.
oIndicates no change compared with classification performance without patient data.
pIndicates degradation compared with classification performance without patient data.
qThis implies that the lesion type was not considered in the classification task of the study.