Literature DB >> 34253770

Computing the orientational-average of diffusion-weighted MRI signals: a comparison of different techniques.

Maryam Afzali1,2, Hans Knutsson3,4, Evren Özarslan3,4, Derek K Jones5.   

Abstract

Numerous applications in diffusion MRI involve computing the orientationally-averaged diffusion-weighted signal. Most approaches implicitly assume, for a given b-value, that the gradient sampling vectors are uniformly distributed on a sphere (or 'shell'), computing the orientationally-averaged signal through simple arithmetic averaging. One challenge with this approach is that not all acquisition schemes have gradient sampling vectors distributed over perfect spheres. To ameliorate this challenge, alternative averaging methods include: weighted signal averaging; spherical harmonic representation of the signal in each shell; and using Mean Apparent Propagator MRI (MAP-MRI) to derive a three-dimensional signal representation and estimate its 'isotropic part'. Here, these different methods are simulated and compared under different signal-to-noise (SNR) realizations. With sufficiently dense sampling points (61 orientations per shell), and isotropically-distributed sampling vectors, all averaging methods give comparable results, (MAP-MRI-based estimates give slightly higher accuracy, albeit with slightly elevated bias as b-value increases). As the SNR and number of data points per shell are reduced, MAP-MRI-based approaches give significantly higher accuracy compared with the other methods. We also apply these approaches to in vivo data where the results are broadly consistent with our simulations. A statistical analysis of the simulated data shows that the orientationally-averaged signals at each b-value are largely Gaussian distributed.
© 2021. The Author(s).

Entities:  

Year:  2021        PMID: 34253770     DOI: 10.1038/s41598-021-93558-1

Source DB:  PubMed          Journal:  Sci Rep        ISSN: 2045-2322            Impact factor:   4.379


  8 in total

1.  Generalized diffusion tensor imaging and analytical relationships between diffusion tensor imaging and high angular resolution diffusion imaging.

Authors:  Evren Ozarslan; Thomas H Mareci
Journal:  Magn Reson Med       Date:  2003-11       Impact factor: 4.668

2.  Temporal scaling characteristics of diffusion as a new MRI contrast: findings in rat hippocampus.

Authors:  Evren Özarslan; Timothy M Shepherd; Cheng Guan Koay; Stephen J Blackband; Peter J Basser
Journal:  Neuroimage       Date:  2012-01-26       Impact factor: 6.556

3.  Generalized scalar measures for diffusion MRI using trace, variance, and entropy.

Authors:  Evren Ozarslan; Baba C Vemuri; Thomas H Mareci
Journal:  Magn Reson Med       Date:  2005-04       Impact factor: 4.668

4.  Regularized, fast, and robust analytical Q-ball imaging.

Authors:  Maxime Descoteaux; Elaine Angelino; Shaun Fitzgibbons; Rachid Deriche
Journal:  Magn Reson Med       Date:  2007-09       Impact factor: 4.668

5.  Sparse and optimal acquisition design for diffusion MRI and beyond.

Authors:  Cheng Guan Koay; Evren Ozarslan; Kevin M Johnson; M Elizabeth Meyerand
Journal:  Med Phys       Date:  2012-05       Impact factor: 4.071

6.  Quantitative in vivo assessment of lung microstructure at the alveolar level with hyperpolarized 3He diffusion MRI.

Authors:  Dmitriy A Yablonskiy; Alexander L Sukstanskii; Jason C Leawoods; David S Gierada; G Larry Bretthorst; Stephen S Lefrak; Joel D Cooper; Mark S Conradi
Journal:  Proc Natl Acad Sci U S A       Date:  2002-02-26       Impact factor: 11.205

7.  A signal transformational framework for breaking the noise floor and its applications in MRI.

Authors:  Cheng Guan Koay; Evren Ozarslan; Peter J Basser
Journal:  J Magn Reson       Date:  2008-12-06       Impact factor: 2.229

8.  Sparse Reconstruction Challenge for diffusion MRI: Validation on a physical phantom to determine which acquisition scheme and analysis method to use?

Authors:  Lipeng Ning; Frederik Laun; Yaniv Gur; Edward V R DiBella; Samuel Deslauriers-Gauthier; Thinhinane Megherbi; Aurobrata Ghosh; Mauro Zucchelli; Gloria Menegaz; Rutger Fick; Samuel St-Jean; Michael Paquette; Ramon Aranda; Maxime Descoteaux; Rachid Deriche; Lauren O'Donnell; Yogesh Rathi
Journal:  Med Image Anal       Date:  2015-11-10       Impact factor: 8.545

  8 in total

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