Literature DB >> 15799039

Generalized scalar measures for diffusion MRI using trace, variance, and entropy.

Evren Ozarslan1, Baba C Vemuri, Thomas H Mareci.   

Abstract

This paper details the derivation of rotationally invariant scalar measures from higher-rank diffusion tensors (DTs) and functions defined on a unit sphere. This was accomplished with the use of an expression that generalizes the evaluation of the trace operator to tensors of arbitrary rank, and even to functions whose domains are the unit sphere. It is shown that the mean diffusivity is invariant to the selection of tensor rank for the model used. However, this rank invariance does not apply to the anisotropy measures. Therefore, a variance-based, general anisotropy measure is proposed. Also an information theoretical parametrization of anisotropy is introduced that is frequently more consistent with the meaning attributed to anisotropy. We accomplished this by associating anisotropy with the amount of orientational information present in the data, regardless of the imaging technique used. Using a simplified model of fibrous tissue, we simulated anisotropy values with varying orientational complexity and tensor models. Simulations suggested that a lower-rank tensor model may produce artificially low anisotropy values in voxels with complex structure. This was confirmed with a spin-echo experiment performed on an excised rat brain. Copyright 2005 Wiley-Liss, Inc.

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Year:  2005        PMID: 15799039     DOI: 10.1002/mrm.20411

Source DB:  PubMed          Journal:  Magn Reson Med        ISSN: 0740-3194            Impact factor:   4.668


  45 in total

1.  Temporal scaling characteristics of diffusion as a new MRI contrast: findings in rat hippocampus.

Authors:  Evren Özarslan; Timothy M Shepherd; Cheng Guan Koay; Stephen J Blackband; Peter J Basser
Journal:  Neuroimage       Date:  2012-01-26       Impact factor: 6.556

2.  Voxelized Model of Brain Infusion That Accounts for Small Feature Fissures: Comparison With Magnetic Resonance Tracer Studies.

Authors:  Wei Dai; Garrett W Astary; Aditya K Kasinadhuni; Paul R Carney; Thomas H Mareci; Malisa Sarntinoranont
Journal:  J Biomech Eng       Date:  2016-05       Impact factor: 2.097

3.  Rotation invariant features for HARDI.

Authors:  Evan Schwab; H Ertan Cetingül; Bijan Afsari; René Vidal
Journal:  Inf Process Med Imaging       Date:  2013

4.  Biomarkers for identifying first-episode schizophrenia patients using diffusion weighted imaging.

Authors:  Yogesh Rathi; James Malcolm; Oleg Michailovich; Jill Goldstein; Larry Seidman; Robert W McCarley; Carl-Fredrik Westin; Martha E Shenton
Journal:  Med Image Comput Comput Assist Interv       Date:  2010

5.  A unified computational framework for deconvolution to reconstruct multiple fibers from diffusion weighted MRI.

Authors:  Bing Jian; Baba C Vemuri
Journal:  IEEE Trans Med Imaging       Date:  2007-11       Impact factor: 10.048

6.  Biexponential and diffusional kurtosis imaging, and generalised diffusion-tensor imaging (GDTI) with rank-4 tensors: a study in a group of healthy subjects.

Authors:  Ludovico Minati; Domenico Aquino; Stefano Rampoldi; Sergio Papa; Marina Grisoli; Maria Grazia Bruzzone; Elio Maccagnano
Journal:  MAGMA       Date:  2007-11-29       Impact factor: 2.310

7.  Anisotropy induced by macroscopic boundaries: surface-normal mapping using diffusion-weighted imaging.

Authors:  Evren Ozarslan; Uri Nevo; Peter J Basser
Journal:  Biophys J       Date:  2007-12-07       Impact factor: 4.033

8.  A novel tensor distribution model for the diffusion-weighted MR signal.

Authors:  Bing Jian; Baba C Vemuri; Evren Ozarslan; Paul R Carney; Thomas H Mareci
Journal:  Neuroimage       Date:  2007-05-03       Impact factor: 6.556

9.  The Impact of Alcohol Use on Frontal White Matter in HIV.

Authors:  Joseph M Gullett; Damon G Lamb; Eric Porges; Adam J Woods; Jake Rieke; Paul Thompson; Neda Jahanshad; Talia M Nir; Karen Tashima; Ronald A Cohen
Journal:  Alcohol Clin Exp Res       Date:  2018-07-16       Impact factor: 3.455

10.  Mean apparent propagator (MAP) MRI: a novel diffusion imaging method for mapping tissue microstructure.

Authors:  Evren Özarslan; Cheng Guan Koay; Timothy M Shepherd; Michal E Komlosh; M Okan İrfanoğlu; Carlo Pierpaoli; Peter J Basser
Journal:  Neuroimage       Date:  2013-04-13       Impact factor: 6.556

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