| Literature DB >> 34230058 |
Marta García-Fiñana1, David M Hughes2, Christopher P Cheyne2, Girvan Burnside2, Mark Stockbridge3, Tom A Fowler3,4, Veronica L Fowler3, Mark H Wilcox5, Malcolm G Semple6,7, Iain Buchan8.
Abstract
OBJECTIVE: To assess the performance of the SARS-CoV-2 antigen rapid lateral flow test (LFT) versus polymerase chain reaction testing in the asymptomatic general population attending testing centres.Entities:
Mesh:
Year: 2021 PMID: 34230058 PMCID: PMC8259455 DOI: 10.1136/bmj.n1637
Source DB: PubMed Journal: BMJ ISSN: 0959-8138
Results of rapid lateral flow test (LFT) and quantitative reverse-transcriptase polymerase chain reaction (RT-qPCR) tests in quality assurance dataset (5869 participants)
| LFT result | RT-qPCR result | Predictive values | |||
|---|---|---|---|---|---|
| Positive | Negative | Void | Total (%) | ||
| Positive | 28 | 3 | 2 | 33 (0.6) | 90.3 (74.2 to 98.0) |
| Negative | 42 | 5431 | 341 | 5814 (99.1) | 99.2 (99.0 to 99.4) |
| Void | 4 | 18 | 0 | 22 (0.4) | |
| Total (%) | 74 (1.3) | 5452 (92.9) | 343 (5.8) | 5869 | |
| Sensitivity (%, 95% CI) | 40.0 (28.5 to 52.4) | ||||
| Specificity (%, 95% CI) | 99.9 (99.8 to 99.99) | ||||
Fig 1Number of participants with negative and positive lateral flow test (LFT) results by quantitative reverse-transcriptase polymerase chain reaction (RT-qPCR) viral load (based on mean cycle threshold (Ct) score across three gene targets). Intervals show the 95% confidence interval for the cumulative sensitivity to detect viral loads >1, >102, >104, and >106 RNA copies/mL
Results of rapid lateral flow test (LFT) with a breakdown by cycle threshold (Ct) value
| RT-qPCR test (mean across three gene targets) | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Ct (RNA copies/mL) | Void tests with Ct value | Negative | ||||||||
| <18.3 (>106) | 18.3-<24.4 (>104-106) | 24.4-<30.5 (>102-104) | 30.5-<35 (≤102) | Positive (NA)* | 30-<35 | ≥35 | No Ct values† | |||
|
| ||||||||||
| LFT site results: | ||||||||||
| Negative | 1 | 10 | 14 | 17 | 5 | 8 | 328 | 5431 | ||
| Positive | 10 | 15 | 3 | 0 | 0 | 0 | 2 | 3 | ||
| Void | 0 | 4 | 0 | 0 | 0 | 0 | 0 | 18 | ||
| Sensitivity (%, 95% CI) | 90.9 (58.7 to 99.8) | 60.0 (38.7 to 78.9) | 17.6 (3.8 to 43.4) | 0.0 (0.0 to 19.5) | ||||||
| Cumulative sensitivity‡ (%, 95% CI) | 90.9 (58.7 to 99.8) | 69.4 (51.9 to 83.7) | 52.8 (38.6 to 66.7) | 40.0 (28.5 to 52.4) | ||||||
|
| ||||||||||
| LFT site results: | ||||||||||
| Negative | 1 | 8 | 16 | 15 | 2 | 6 | 4 | 331 | 5431 | |
| Positive | 7 | 17 | 3 | 1 | 0 | 0 | 0 | 2 | 3 | |
| Void | 0 | 4 | 0 | 0 | 0 | 0 | 0 | 0 | 18 | |
| Sensitivity (%, 95% CI) | 87.5 (47.3 to 99.7) | 68.0 (46.5 to 85.1) | 15.8 (3.4 to 39.6) | 6.3 (0.1 to 30.2) | ||||||
| Cumulative sensitivity‡ (%, 95% CI) | 87.5 (47.3 to 99.7) | 72.7 (54.5 to 86.7) | 51.9 (37.6 to 66.0) | 41.2 (29.4 to 53.8) | ||||||
|
| ||||||||||
| LFT site results: | ||||||||||
| Negative | 1 | 10 | 13 | 9 | 9 | 1 | 4 | 336 | 5431 | |
| Positive | 10 | 15 | 3 | 0 | 0 | 0 | 2 | 3 | ||
| Void | 0 | 4 | 0 | 0 | 0 | 0 | 0 | 18 | ||
| Sensitivity (%, 95% CI) | 90.9 (58.7 to 99.8) | 60.0 (38.6 to 78.9) | 18.8 (4.0 to 45.6) | 0.0 (0.0 to 33.6) | ||||||
| Cumulative sensitivity‡ (95% CI) | 90.9 (58.7 to 99.8) | 69.4 (52.9 to 83.7) | 53.8 (39.5 to 67.8) | 45.9 (33.1t o 59.2) | ||||||
|
| ||||||||||
| LFT site results: | ||||||||||
| Negative | 3 | 10 | 13 | 8 | 7 | 1 | 2 | 338 | 5431 | |
| Positive | 12 | 14 | 2 | 0 | 0 | 0 | 0 | 2 | 3 | |
| Void | 1 | 3 | 0 | 0 | 0 | 0 | 0 | 0 | 18 | |
| Sensitivity (%, 95% CI) | 80.0 (51.9 to 95.7) | 58.3 (36.6 to 77.9) | 13.3 (1.7 to 40.5) | 0.0 (0.0 to 36.9) | ||||||
| Cumulative sensitivity‡ (%, 95% CI) | 80.0 (51.9 to 95.7) | 66.7 (49.8 to 80.9) | 51.9 (37.8 to 65.7) | 45.2 (32.5 to 58.3) | ||||||
RT-qPCR=quantitative reverse-transcriptase polymerase chain reaction; NA=not applicable (missing gene target).
Implies PCR result was graded as positive but particular target gene was not detected for that sample.
When void PCR results were returned, Ct value was observed for at least one target gene in a small number of participants, but this was determined to be inconclusive.
Defined using number of samples with Ct less than upper threshold.
Fig 2Cumulative sensitivity of Innova lateral flow test (LFT) against quantitative reverse-transcriptase polymerase chain reaction (RT-qPCR) cycle threshold (Ct). Dashed orange lines show approximate viral loads (RNA copies/mL)