Literature DB >> 34216503

An optogenetic assay method for electrogenic transporters using Escherichia coli co-expressing light-driven proton pump.

Masahiro Hayashi1, Keiichi Kojima1, Yuki Sudo1, Atsuko Yamashita1.   

Abstract

In organisms, nutrients and wastes move across the cellular membrane, in which membrane-embedded transporters facilitate and inhibit the movement. Despite the physiological significances, the currently used assay methods for transporter activities require tedious preparation and analytical processes. In this study, we report the isotope-free and label-free measurement system for the transport activities of electrogenic transporters. In the system, two molecules, a light-driven inward proton pump rhodopsin, xenorhodopsin (XeR), and a representative of an electrogenic transporter, an oxalate transporter (OxlT), were co-expressed in Escherichia coli cells. The light illumination of the cells co-expressing XeR and OxlT showed an increase in the pH of the bulk solution and that the extent of the pH change is significantly enhanced by adding the oxalate, suggesting the light-induced inward proton transport by XeR coupled to the negative electrogenic transport by OxlT. Such a pH increase was dependent on the oxalate concentration, but not on the XeR expression level. Of note, pH increase was not observed for the nonfunctional mutants of OxlT, R272A, and K355Q, supporting the validity of the system. Thus, we successfully developed an optogenetic assay method for electrogenic transporters using E. coli co-expressing light-driven proton pump.
© 2021 The Protein Society.

Entities:  

Keywords:  E. coli; electrogenic; light-driven proton pump; oxalate transporter; transporter; xenorhodopsin

Mesh:

Substances:

Year:  2021        PMID: 34216503      PMCID: PMC8442964          DOI: 10.1002/pro.4154

Source DB:  PubMed          Journal:  Protein Sci        ISSN: 0961-8368            Impact factor:   6.993


  36 in total

1.  Fluorescence techniques for studying membrane transport proteins: the P-glycoprotein multidrug transporter.

Authors:  Frances J Sharom; Paula L Russell; Qin Qu; Peihua Lu
Journal:  Methods Mol Biol       Date:  2003

Review 2.  Microbial and animal rhodopsins: structures, functions, and molecular mechanisms.

Authors:  Oliver P Ernst; David T Lodowski; Marcus Elstner; Peter Hegemann; Leonid S Brown; Hideki Kandori
Journal:  Chem Rev       Date:  2013-12-23       Impact factor: 60.622

Review 3.  A high throughput flow cytometric assay platform targeting transporter inhibition.

Authors:  George P Tegos; Annette M Evangelisti; J Jacob Strouse; Oleg Ursu; Cristian Bologa; Larry A Sklar
Journal:  Drug Discov Today Technol       Date:  2014-06

4.  THE CONCISE GUIDE TO PHARMACOLOGY 2019/20: Transporters.

Authors:  Stephen P H Alexander; Eamonn Kelly; Alistair Mathie; John A Peters; Emma L Veale; Jane F Armstrong; Elena Faccenda; Simon D Harding; Adam J Pawson; Joanna L Sharman; Christopher Southan; Jamie A Davies
Journal:  Br J Pharmacol       Date:  2019-12       Impact factor: 8.739

5.  Experimental tests of a homology model for OxlT, the oxalate transporter of Oxalobacter formigenes.

Authors:  Qiang Yang; Xicheng Wang; Liwen Ye; Mark Mentrikoski; Elham Mohammadi; Young-Mog Kim; Peter C Maloney
Journal:  Proc Natl Acad Sci U S A       Date:  2005-06-02       Impact factor: 11.205

Review 6.  Major facilitator superfamily.

Authors:  S S Pao; I T Paulsen; M H Saier
Journal:  Microbiol Mol Biol Rev       Date:  1998-03       Impact factor: 11.056

7.  Microscale fluorescent thermal stability assay for membrane proteins.

Authors:  Alexander I Alexandrov; Mauro Mileni; Ellen Y T Chien; Michael A Hanson; Raymond C Stevens
Journal:  Structure       Date:  2008-03       Impact factor: 5.006

8.  Channelrhodopsin-1 initiates phototaxis and photophobic responses in chlamydomonas by immediate light-induced depolarization.

Authors:  Peter Berthold; Satoshi P Tsunoda; Oliver P Ernst; Wolfgang Mages; Dietrich Gradmann; Peter Hegemann
Journal:  Plant Cell       Date:  2008-06-13       Impact factor: 11.277

Review 9.  Overexpression of membrane proteins in mammalian cells for structural studies.

Authors:  Juni Andréll; Christopher G Tate
Journal:  Mol Membr Biol       Date:  2012-09-11       Impact factor: 2.857

10.  Proteoliposomes as tool for assaying membrane transporter functions and interactions with xenobiotics.

Authors:  Mariafrancesca Scalise; Lorena Pochini; Nicola Giangregorio; Annamaria Tonazzi; Cesare Indiveri
Journal:  Pharmaceutics       Date:  2013-09-18       Impact factor: 6.321

View more
  2 in total

Review 1.  Rhodopsins: An Excitingly Versatile Protein Species for Research, Development and Creative Engineering.

Authors:  Willem J de Grip; Srividya Ganapathy
Journal:  Front Chem       Date:  2022-06-22       Impact factor: 5.545

2.  An optogenetic assay method for electrogenic transporters using Escherichia coli co-expressing light-driven proton pump.

Authors:  Masahiro Hayashi; Keiichi Kojima; Yuki Sudo; Atsuko Yamashita
Journal:  Protein Sci       Date:  2021-07-10       Impact factor: 6.993

  2 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.