Literature DB >> 34206803

Expression Status and Prognostic Value of m6A RNA Methylation Regulators in Lung Adenocarcinoma.

Xiuhong Li1, Zian Feng1, Rui Wang2, Jie Hu1, Xiaodong He3, Zuojun Shen1,2.   

Abstract

N6-methyladenosine (m6A) RNA modification is the most abundant modification method in mRNA, and it plays an important role in the occurrence and development of many cancers. This paper mainly discusses the role of m6A RNA methylation regulators in lung adenocarcinoma (LUAD) to identify novel prognostic biomarkers. The gene expression data of 19 m6A methylation regulators in LUAD patients and its relevant clinical parameters were extracted from The Cancer Genome Atlas (TCGA) database. We selected three significantly differentially expressed m6A regulators in LUAD to construct the risk signature, and evaluated its prognostic prediction efficiency using the receiver operating characteristic (ROC) curve. Kaplan-Meier survival analysis and Cox regression analysis were used to identify the independent prognostic significance of the risk signature. The ROC curve indicated that the area under the curve (AUC) was 0.659, which means that the risk signature had a good prediction efficiency. The results of the Kaplan-Meier survival analysis and Cox regression analysis showed that the risk score can be used as an independent prognostic factor for LUAD. In addition, we explored the differential signaling pathways and cellular processes related to m6A methylation regulators in LUAD.

Entities:  

Keywords:  lung adenocarcinoma; m6A methylation; prognostic signature; survival analysis

Year:  2021        PMID: 34206803     DOI: 10.3390/life11070619

Source DB:  PubMed          Journal:  Life (Basel)        ISSN: 2075-1729


  42 in total

1.  Stem cells. m6A mRNA methylation facilitates resolution of naïve pluripotency toward differentiation.

Authors:  Shay Geula; Sharon Moshitch-Moshkovitz; Dan Dominissini; Abed AlFatah Mansour; Nitzan Kol; Mali Salmon-Divon; Vera Hershkovitz; Eyal Peer; Nofar Mor; Yair S Manor; Moshe Shay Ben-Haim; Eran Eyal; Sharon Yunger; Yishay Pinto; Diego Adhemar Jaitin; Sergey Viukov; Yoach Rais; Vladislav Krupalnik; Elad Chomsky; Mirie Zerbib; Itay Maza; Yoav Rechavi; Rada Massarwa; Suhair Hanna; Ido Amit; Erez Y Levanon; Ninette Amariglio; Noam Stern-Ginossar; Noa Novershtern; Gideon Rechavi; Jacob H Hanna
Journal:  Science       Date:  2015-01-01       Impact factor: 47.728

Review 2.  Rethinking m6A Readers, Writers, and Erasers.

Authors:  Kate D Meyer; Samie R Jaffrey
Journal:  Annu Rev Cell Dev Biol       Date:  2017-07-31       Impact factor: 13.827

3.  m6A demethylase FTO promotes hepatocellular carcinoma tumorigenesis via mediating PKM2 demethylation.

Authors:  Jie Li; Lijun Zhu; Yanhong Shi; Jingnan Liu; Lin Lin; Xi Chen
Journal:  Am J Transl Res       Date:  2019-09-15       Impact factor: 4.060

4.  Insulin-like growth factor 2 mRNA-binding protein 1 (IGF2BP1) is an important protumorigenic factor in hepatocellular carcinoma.

Authors:  Tony Gutschner; Monika Hämmerle; Nikolaos Pazaitis; Nadine Bley; Evgenij Fiskin; Hannah Uckelmann; Andreas Heim; Matthias Groβ; Nina Hofmann; Robert Geffers; Britta Skawran; Thomas Longerich; Kai Breuhahn; Peter Schirmacher; Britta Mühleck; Stefan Hüttelmaier; Sven Diederichs
Journal:  Hepatology       Date:  2014-04-01       Impact factor: 17.425

5.  limma powers differential expression analyses for RNA-sequencing and microarray studies.

Authors:  Matthew E Ritchie; Belinda Phipson; Di Wu; Yifang Hu; Charity W Law; Wei Shi; Gordon K Smyth
Journal:  Nucleic Acids Res       Date:  2015-01-20       Impact factor: 16.971

Review 6.  Non-Small Cell Lung Cancer: Epidemiology, Screening, Diagnosis, and Treatment.

Authors:  Narjust Duma; Rafael Santana-Davila; Julian R Molina
Journal:  Mayo Clin Proc       Date:  2019-08       Impact factor: 7.616

7.  The epitranscriptome m6A writer METTL3 promotes chemo- and radioresistance in pancreatic cancer cells.

Authors:  Kosuke Taketo; Masamitsu Konno; Ayumu Asai; Jun Koseki; Masayasu Toratani; Taroh Satoh; Yuichiro Doki; Masaki Mori; Hideshi Ishii; Kazuhiko Ogawa
Journal:  Int J Oncol       Date:  2017-12-07       Impact factor: 5.650

8.  RNA N6-methyladenosine demethylase FTO promotes breast tumor progression through inhibiting BNIP3.

Authors:  Yi Niu; Ziyou Lin; Arabella Wan; Honglei Chen; Heng Liang; Lei Sun; Yuan Wang; Xi Li; Xiao-Feng Xiong; Bo Wei; Xiaobin Wu; Guohui Wan
Journal:  Mol Cancer       Date:  2019-03-28       Impact factor: 27.401

9.  Recognition of RNA N6-methyladenosine by IGF2BP proteins enhances mRNA stability and translation.

Authors:  Huilin Huang; Hengyou Weng; Wenju Sun; Xi Qin; Hailing Shi; Huizhe Wu; Boxuan Simen Zhao; Ana Mesquita; Chang Liu; Celvie L Yuan; Yueh-Chiang Hu; Stefan Hüttelmaier; Jennifer R Skibbe; Rui Su; Xiaolan Deng; Lei Dong; Miao Sun; Chenying Li; Sigrid Nachtergaele; Yungui Wang; Chao Hu; Kyle Ferchen; Kenneth D Greis; Xi Jiang; Minjie Wei; Lianghu Qu; Jun-Lin Guan; Chuan He; Jianhua Yang; Jianjun Chen
Journal:  Nat Cell Biol       Date:  2018-02-23       Impact factor: 28.824

10.  Expression Status And Prognostic Value Of M6A-associated Genes in Gastric Cancer.

Authors:  Kelei Guan; Xin Liu; Jianhao Li; Yanxia Ding; Juan Li; Guangying Cui; Xichun Cui; Ranran Sun
Journal:  J Cancer       Date:  2020-03-04       Impact factor: 4.207

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  2 in total

1.  Establishment of Prognostic Signatures of N6-Methyladenosine-Related lncRNAs and Their Potential Functions in Hepatocellular Carcinoma Patients.

Authors:  Xianbin Wu; Zhejun Deng; Xiaomin Liao; Xianxian Ruan; Nanfang Qu; Lixing Pang; Xiaoyan Shi; Shanyu Qin; Haixing Jiang
Journal:  Front Oncol       Date:  2022-06-06       Impact factor: 5.738

2.  The Regulators Associated With N6-Methyladenosine in Lung Adenocarcinoma and Lung Squamous Cell Carcinoma Reveal New Clinical and Prognostic Markers.

Authors:  Shuzhen Tan; Zesong Li; Kai Li; Yingqi Li; Guosheng Liang; Zhenye Tang; Jianhao Kang; Wenqing Chen; Minhua Li; Zhilin Zou; Guoliang Pi; Xiao Zhu
Journal:  Front Cell Dev Biol       Date:  2021-12-09
  2 in total

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