Literature DB >> 34197732

Maximally selective single-cell target for circuit control in epilepsy models.

Darian Hadjiabadi1, Matthew Lovett-Barron2, Ivan Georgiev Raikov3, Fraser T Sparks4, Zhenrui Liao4, Scott C Baraban5, Jure Leskovec6, Attila Losonczy4, Karl Deisseroth7, Ivan Soltesz3.   

Abstract

Neurological and psychiatric disorders are associated with pathological neural dynamics. The fundamental connectivity patterns of cell-cell communication networks that enable pathological dynamics to emerge remain unknown. Here, we studied epileptic circuits using a newly developed computational pipeline that leveraged single-cell calcium imaging of larval zebrafish and chronically epileptic mice, biologically constrained effective connectivity modeling, and higher-order motif-focused network analysis. We uncovered a novel functional cell type that preferentially emerged in the preseizure state, the superhub, that was unusually richly connected to the rest of the network through feedforward motifs, critically enhancing downstream excitation. Perturbation simulations indicated that disconnecting superhubs was significantly more effective in stabilizing epileptic circuits than disconnecting hub cells that were defined traditionally by connection count. In the dentate gyrus of chronically epileptic mice, superhubs were predominately modeled adult-born granule cells. Collectively, these results predict a new maximally selective and minimally invasive cellular target for seizure control. Published by Elsevier Inc.

Entities:  

Keywords:  adult-born granule cells; calcium imaging; effective connectivity modeling; epilepsy; higher-order organization; hubs; motifs; network science; seizure control; single-cells

Mesh:

Year:  2021        PMID: 34197732      PMCID: PMC8448204          DOI: 10.1016/j.neuron.2021.06.007

Source DB:  PubMed          Journal:  Neuron        ISSN: 0896-6273            Impact factor:   18.688


  70 in total

Review 1.  Functional and effective connectivity: a review.

Authors:  Karl J Friston
Journal:  Brain Connect       Date:  2011

2.  Efficient detection of network motifs.

Authors:  Sebastian Wernicke
Journal:  IEEE/ACM Trans Comput Biol Bioinform       Date:  2006 Oct-Dec       Impact factor: 3.710

3.  GABAergic hub neurons orchestrate synchrony in developing hippocampal networks.

Authors:  P Bonifazi; M Goldin; M A Picardo; I Jorquera; A Cattani; G Bianconi; A Represa; Y Ben-Ari; R Cossart
Journal:  Science       Date:  2009-12-04       Impact factor: 47.728

4.  Mapping brain activity at scale with cluster computing.

Authors:  Jeremy Freeman; Nikita Vladimirov; Takashi Kawashima; Yu Mu; Nicholas J Sofroniew; Davis V Bennett; Joshua Rosen; Chao-Tsung Yang; Loren L Looger; Misha B Ahrens
Journal:  Nat Methods       Date:  2014-07-27       Impact factor: 28.547

5.  SNAP: A General Purpose Network Analysis and Graph Mining Library.

Authors:  Jure Leskovec; Rok Sosič
Journal:  ACM Trans Intell Syst Technol       Date:  2016-10-03       Impact factor: 4.654

6.  Pentylenetetrazole induced changes in zebrafish behavior, neural activity and c-fos expression.

Authors:  S C Baraban; M R Taylor; P A Castro; H Baier
Journal:  Neuroscience       Date:  2005       Impact factor: 3.590

7.  Epileptiform burst activity induced by potassium in the hippocampus and its regulation by GABA-mediated inhibition.

Authors:  S J Korn; J L Giacchino; N L Chamberlin; R Dingledine
Journal:  J Neurophysiol       Date:  1987-01       Impact factor: 2.714

8.  Local Higher-Order Graph Clustering.

Authors:  Hao Yin; Austin R Benson; Jure Leskovec; David F Gleich
Journal:  KDD       Date:  2017-08

9.  Organizing principles of whole-brain functional connectivity in zebrafish larvae.

Authors:  Richard F Betzel
Journal:  Netw Neurosci       Date:  2020-03-01

10.  Hippocampal adult-born granule cells drive network activity in a mouse model of chronic temporal lobe epilepsy.

Authors:  F T Sparks; Z Liao; W Li; A Grosmark; I Soltesz; A Losonczy
Journal:  Nat Commun       Date:  2020-12-01       Impact factor: 14.919

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  7 in total

1.  A new class of hub.

Authors:  Darran Yates
Journal:  Nat Rev Neurosci       Date:  2021-07-30       Impact factor: 34.870

2.  In vitro ictogenesis is stochastic at the single neuron level.

Authors:  Lauren A Lau; Kevin J Staley; Kyle P Lillis
Journal:  Brain       Date:  2022-04-18       Impact factor: 15.255

Review 3.  Optogenetic Methods to Investigate Brain Alterations in Preclinical Models.

Authors:  Marco Brondi; Matteo Bruzzone; Claudia Lodovichi; Marco Dal Maschio
Journal:  Cells       Date:  2022-06-05       Impact factor: 7.666

4.  Neuronal Superhubs: Elite Networks that Rule Synchrony.

Authors:  Shilpa D Kadam
Journal:  Epilepsy Curr       Date:  2021-10-19       Impact factor: 7.500

5.  Network analysis of preictal iEEG reveals changes in network structure preceding seizure onset.

Authors:  Stefan Sumsky; L John Greenfield
Journal:  Sci Rep       Date:  2022-07-22       Impact factor: 4.996

Review 6.  Aquatic Freshwater Vertebrate Models of Epilepsy Pathology: Past Discoveries and Future Directions for Therapeutic Discovery.

Authors:  Rachel E Williams; Karen Mruk
Journal:  Int J Mol Sci       Date:  2022-08-03       Impact factor: 6.208

7.  Maximally selective single-cell target for circuit control in epilepsy models.

Authors:  Darian Hadjiabadi; Matthew Lovett-Barron; Ivan Georgiev Raikov; Fraser T Sparks; Zhenrui Liao; Scott C Baraban; Jure Leskovec; Attila Losonczy; Karl Deisseroth; Ivan Soltesz
Journal:  Neuron       Date:  2021-06-30       Impact factor: 18.688

  7 in total

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