Literature DB >> 29770258

Local Higher-Order Graph Clustering.

Hao Yin1, Austin R Benson1, Jure Leskovec1, David F Gleich2.   

Abstract

Local graph clustering methods aim to find a cluster of nodes by exploring a small region of the graph. These methods are attractive because they enable targeted clustering around a given seed node and are faster than traditional global graph clustering methods because their runtime does not depend on the size of the input graph. However, current local graph partitioning methods are not designed to account for the higher-order structures crucial to the network, nor can they effectively handle directed networks. Here we introduce a new class of local graph clustering methods that address these issues by incorporating higher-order network information captured by small subgraphs, also called network motifs. We develop the Motif-based Approximate Personalized PageRank (MAPPR) algorithm that finds clusters containing a seed node with minimal motif conductance, a generalization of the conductance metric for network motifs. We generalize existing theory to prove the fast running time (independent of the size of the graph) and obtain theoretical guarantees on the cluster quality (in terms of motif conductance). We also develop a theory of node neighborhoods for finding sets that have small motif conductance, and apply these results to the case of finding good seed nodes to use as input to the MAPPR algorithm. Experimental validation on community detection tasks in both synthetic and real-world networks, shows that our new framework MAPPR outperforms the current edge-based personalized PageRank methodology.

Entities:  

Year:  2017        PMID: 29770258      PMCID: PMC5951164          DOI: 10.1145/3097983.3098069

Source DB:  PubMed          Journal:  KDD        ISSN: 2154-817X


  10 in total

1.  Network motifs: simple building blocks of complex networks.

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Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2009-07-31

5.  Tensor Spectral Clustering for Partitioning Higher-order Network Structures.

Authors:  Austin R Benson; David F Gleich; Jure Leskovec
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6.  Think locally, act locally: detection of small, medium-sized, and large communities in large networks.

Authors:  Lucas G S Jeub; Prakash Balachandran; Mason A Porter; Peter J Mucha; Michael W Mahoney
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2015-01-26

7.  Higher-order organization of complex networks.

Authors:  Austin R Benson; David F Gleich; Jure Leskovec
Journal:  Science       Date:  2016-07-08       Impact factor: 47.728

8.  Motifs in brain networks.

Authors:  Olaf Sporns; Rolf Kötter
Journal:  PLoS Biol       Date:  2004-10-26       Impact factor: 8.029

9.  Revealing the hidden language of complex networks.

Authors:  Ömer Nebil Yaveroğlu; Noël Malod-Dognin; Darren Davis; Zoran Levnajic; Vuk Janjic; Rasa Karapandza; Aleksandar Stojmirovic; Nataša Pržulj
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10.  Spectral affinity in protein networks.

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  10 in total
  10 in total

1.  Local hypergraph clustering using capacity releasing diffusion.

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Journal:  PLoS One       Date:  2020-12-23       Impact factor: 3.240

2.  Identification of caveolin-1 domain signatures via machine learning and graphlet analysis of single-molecule super-resolution data.

Authors:  Ismail M Khater; Fanrui Meng; Ivan Robert Nabi; Ghassan Hamarneh
Journal:  Bioinformatics       Date:  2019-09-15       Impact factor: 6.937

3.  COMICS: a community property-based triangle motif clustering scheme.

Authors:  Yufan Feng; Shuo Yu; Kaiyuan Zhang; Xiangli Li; Zhaolong Ning
Journal:  PeerJ Comput Sci       Date:  2019-03-11

4.  Positively Correlated Samples Save Pooled Testing Costs.

Authors:  Yi-Jheng Lin; Che-Hao Yu; Tzu-Hsuan Liu; Cheng-Shang Chang; Wen-Tsuen Chen
Journal:  IEEE Trans Netw Sci Eng       Date:  2021-05-20

5.  Impact of second-order network motif on online social networks.

Authors:  Sankhamita Sinha; Subhayan Bhattacharya; Sarbani Roy
Journal:  J Supercomput       Date:  2021-09-24       Impact factor: 2.557

6.  Community Detection on Networks with Ricci Flow.

Authors:  Chien-Chun Ni; Yu-Yao Lin; Feng Luo; Jie Gao
Journal:  Sci Rep       Date:  2019-07-10       Impact factor: 4.379

7.  Information diffusion modeling and analysis for socially interacting networks.

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Journal:  Soc Netw Anal Min       Date:  2021-01-09

8.  Maximally selective single-cell target for circuit control in epilepsy models.

Authors:  Darian Hadjiabadi; Matthew Lovett-Barron; Ivan Georgiev Raikov; Fraser T Sparks; Zhenrui Liao; Scott C Baraban; Jure Leskovec; Attila Losonczy; Karl Deisseroth; Ivan Soltesz
Journal:  Neuron       Date:  2021-06-30       Impact factor: 18.688

9.  SuperNoder: a tool to discover over-represented modular structures in networks.

Authors:  Danilo Dessì; Jacopo Cirrone; Diego Reforgiato Recupero; Dennis Shasha
Journal:  BMC Bioinformatics       Date:  2018-09-10       Impact factor: 3.169

10.  Embedding-based Silhouette community detection.

Authors:  Blaž Škrlj; Jan Kralj; Nada Lavrač
Journal:  Mach Learn       Date:  2020-07-27       Impact factor: 2.940

  10 in total

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