| Literature DB >> 34121044 |
Sumito Matsuya1, Hiroyuki Imai2, Yasuo Kiso2, Ken Takeshi Kusakabe2, Kiyoshi Kano1.
Abstract
We determined the nucleotide sequence of the growth hormone (Gh) gene in Mus minutoides, one of the smallest mammals, where was predicted to be distinct in the functional regions between M. minutoides and Mus musculus. To investigate the evolutionary characteristics of Gh in M. minutoides, we constructed a phylogenetic tree based on the putative amino acid sequences of Gh, suggesting that the Gh of M. minutoides diverged earlier than M. musculus. Furthermore, the Gh gene expressed higher in M. minutoides than in M. musculus. Our results suggest that the specific feature of the Gh in M. minutoides is in rather the regulatory mechanism than the sequence.Entities:
Keywords: Mus minutoides; body size; evolution; growth hormone; mouse
Mesh:
Substances:
Year: 2021 PMID: 34121044 PMCID: PMC8437718 DOI: 10.1292/jvms.21-0231
Source DB: PubMed Journal: J Vet Med Sci ISSN: 0916-7250 Impact factor: 1.267
Primer sequences for the genome sequence of growth hormone (Gh)
| Primer sequences(5’→3’) | |
|---|---|
| F1 | TGTCAGTGGCCCCAGCCATG |
| R1 | CCAGCTTGTGTCTCGTCACCATC |
| F2 | GAGTTCGTAAGTTCCCCAGAGATGG |
| R2 | CTGGATGCCCTCTTCCAGGTCC |
| F3 | GCTCATCCAGTCATGGCTGGG |
| R3 | TGACACAACTGCTCCATCCCATAAC |
Fig. 1.Alignment of a nucleic acid sequence of the genomic region and a putative amino acid sequence of the Gh gene. (A) Alignment of a nucleic acid sequence of the genomic region of the Gh gene between Mus musculus and Mus minutoides. Arrows indicate primers for the nucleotide sequence and qRT-PCR. The upper row is the sequence of M. musculus and the lower row is that of M. minutoides. The region between right-angled arrows is the genomic sequence of the Gh gene in M. musculus. * indicates matching nucleic acids between M. musculus and M. minutoides. Deletions and insertions across the entire region, including exons, were observed in the genomic DNA of M. minutoides. The shaded indicates five exons of M. musculus. (B) Alignment of a putative amino acid sequence of Gh between M. musculus and M. minutoides. The 25th and 37th amino acid sequences of M. musculus are serine, respectively, while two sites are different in M. minutoides: glycine and alanine.
Fig. 2.Phylogenetic tree of the vertebrate Gh. The tree was constructed with the neighbor-joining method using MEGAX from Mus minutoides and 13 other vertebrate Gh amino acid sequences. Gh amino acid sequences were obtained from the Ensembl database. Numbers on nodes represent the frequency with which the node is recovered per 100 bootstrap replications in a total of 1,000.
Primer sequences for RT-PCR
| genes | Primer sequences(5’→3’) | |
|---|---|---|
| F | CGAGGGACAGCGCTATTCCATTC | |
| R | GCTTGAGGATCTGCCCAACACG | |
| F | GTGCTGAGTATGTCGTGGAGTC | |
| R | CATACTTGGCAGGTTTCTCCAG | |
Gh, growth hormone; Gapdh, glyceraldehyde 3-phosphate dehydrogenase
Fig. 3.Transcript levels of Gh in the pituitary gland of Mus minutoides and Mus musculus. Left: The relative expression level for Gh was normalized against the Gapdh expression level. The expression of the Gh gene in M. minutoides was higher than those in M. musculus. Data represent the mean ± standard deviation. Right: RT-PCR analysis was performed for confirmation of the specificity of the primer set.