| Literature DB >> 34106049 |
John W Biddle1, Rosa Martinez-Corral1, Felix Wong2,3, Jeremy Gunawardena1.
Abstract
Integration of binding information by macromolecular entities is fundamental to cellular functionality. Recent work has shown that such integration cannot be explained by pairwise cooperativities, in which binding is modulated by binding at another site. Higher-order cooperativities (HOCs), in which binding is collectively modulated by multiple other binding events, appear to be necessary but an appropriate mechanism has been lacking. We show here that HOCs arise through allostery, in which effective cooperativity emerges indirectly from an ensemble of dynamically interchanging conformations. Conformational ensembles play important roles in many cellular processes but their integrative capabilities remain poorly understood. We show that sufficiently complex ensembles can implement any form of information integration achievable without energy expenditure, including all patterns of HOCs. Our results provide a rigorous biophysical foundation for analysing the integration of binding information through allostery. We discuss the implications for eukaryotic gene regulation, where complex conformational dynamics accompanies widespread information integration.Entities:
Keywords: allostery; conformational ensembles; higher-order coopeartivity; information integration; linear framework; molecular biophysics; none; physics of living systems; structural biology
Year: 2021 PMID: 34106049 PMCID: PMC8189718 DOI: 10.7554/eLife.65498
Source DB: PubMed Journal: Elife ISSN: 2050-084X Impact factor: 8.140