Literature DB >> 34099838

Urine NMR-based TB metabolic fingerprinting for the diagnosis of TB in children.

Patricia Comella-Del-Barrio1,2, José Luis Izquierdo-Garcia2,3,4, Jacqueline Gautier5, Mariette Jean Coute Doresca5, Ramón Campos-Olivas6, Clara M Santiveri6, Beatriz Muriel-Moreno1, Cristina Prat-Aymerich1,2,7, Rosa Abellana8, Tomas M Pérez-Porcuna9, Luis E Cuevas10, Jesús Ruiz-Cabello2,3,4,11, José Domínguez12,13.   

Abstract

Tuberculosis (TB) is a major cause of morbidity and mortality in children, and early diagnosis and treatment are crucial to reduce long-term morbidity and mortality. In this study, we explore whether urine nuclear magnetic resonance (NMR)-based metabolomics could be used to identify differences in the metabolic response of children with different diagnostic certainty of TB. We included 62 children with signs and symptoms of TB and 55 apparently healthy children. Six of the children with presumptive TB had bacteriologically confirmed TB, 52 children with unconfirmed TB, and 4 children with unlikely TB. Urine metabolic fingerprints were identified using high- and low-field proton NMR platforms and assessed with pattern recognition techniques such as principal components analysis and partial least squares discriminant analysis. We observed differences in the metabolic fingerprint of children with bacteriologically confirmed and unconfirmed TB compared to children with unlikely TB (p = 0.041 and p = 0.013, respectively). Moreover, children with unconfirmed TB with X-rays compatible with TB showed differences in the metabolic fingerprint compared to children with non-pathological X-rays (p = 0.009). Differences in the metabolic fingerprint in children with different diagnostic certainty of TB could contribute to a more accurate characterisation of TB in the paediatric population. The use of metabolomics could be useful to improve the prediction of TB progression and diagnosis in children.

Entities:  

Year:  2021        PMID: 34099838     DOI: 10.1038/s41598-021-91545-0

Source DB:  PubMed          Journal:  Sci Rep        ISSN: 2045-2322            Impact factor:   4.379


  14 in total

Review 1.  Metabolic fingerprinting as a diagnostic tool.

Authors:  David I Ellis; Warwick B Dunn; Julian L Griffin; J William Allwood; Royston Goodacre
Journal:  Pharmacogenomics       Date:  2007-09       Impact factor: 2.533

Review 2.  Metabolomics: Applications and Promise in Mycobacterial Disease.

Authors:  Mehdi Mirsaeidi; Mohammad Mehdi Banoei; Brent W Winston; Dean E Schraufnagel
Journal:  Ann Am Thorac Soc       Date:  2015-09

3.  Urine Xpert MTB/RIF for the diagnosis of childhood tuberculosis.

Authors:  Anna Lena Lopez; Josephine G Aldaba; Merrylle Morales-Dizon; Jesus N Sarol; Jedas Veronica Daag; Ma Cecilia Ama; Patrick Sylim; Aida Salonga; Karin Nielsen-Saines
Journal:  Int J Infect Dis       Date:  2018-11-26       Impact factor: 3.623

4.  Metabolomics specificity of tuberculosis plasma revealed by (1)H NMR spectroscopy.

Authors:  Aiping Zhou; Jinjing Ni; Zhihong Xu; Ying Wang; Haomin Zhang; Wenjuan Wu; Shuihua Lu; Petros C Karakousis; Yu-Feng Yao
Journal:  Tuberculosis (Edinb)       Date:  2015-02-14       Impact factor: 3.131

5.  Application of (1)h NMR spectroscopy-based metabolomics to sera of tuberculosis patients.

Authors:  Aiping Zhou; Jinjing Ni; Zhihong Xu; Ying Wang; Shuihua Lu; Wei Sha; Petros C Karakousis; Yu-Feng Yao
Journal:  J Proteome Res       Date:  2013-09-10       Impact factor: 4.466

Review 6.  Update on tuberculosis biomarkers: From correlates of risk, to correlates of active disease and of cure from disease.

Authors:  Delia Goletti; Meng-Rui Lee; Jann-Yuan Wang; Nicholas Walter; Tom H M Ottenhoff
Journal:  Respirology       Date:  2018-02-18       Impact factor: 6.424

7.  Novel lipoarabinomannan point-of-care tuberculosis test for people with HIV: a diagnostic accuracy study.

Authors:  Tobias Broger; Bianca Sossen; Elloise du Toit; Andrew D Kerkhoff; Charlotte Schutz; Elena Ivanova Reipold; Amy Ward; David A Barr; Aurélien Macé; Andre Trollip; Rosie Burton; Stefano Ongarello; Abraham Pinter; Todd L Lowary; Catharina Boehme; Mark P Nicol; Graeme Meintjes; Claudia M Denkinger
Journal:  Lancet Infect Dis       Date:  2019-05-30       Impact factor: 25.071

8.  Metabolomic profile of acute respiratory distress syndrome of different etiologies.

Authors:  José Luis Izquierdo-García; Nicolás Nin; Pablo Cardinal-Fernandez; Jesús Ruiz-Cabello; José Ángel Lorente
Journal:  Intensive Care Med       Date:  2019-05-13       Impact factor: 17.440

Review 9.  Metabolomic fingerprinting: challenges and opportunities.

Authors:  Alyssa K Kosmides; Kubra Kamisoglu; Steve E Calvano; Siobhan A Corbett; Ioannis P Androulakis
Journal:  Crit Rev Biomed Eng       Date:  2013

Review 10.  Recommendations and Standardization of Biomarker Quantification Using NMR-Based Metabolomics with Particular Focus on Urinary Analysis.

Authors:  Abdul-Hamid Emwas; Raja Roy; Ryan T McKay; Danielle Ryan; Lorraine Brennan; Leonardo Tenori; Claudio Luchinat; Xin Gao; Ana Carolina Zeri; G A Nagana Gowda; Daniel Raftery; Christoph Steinbeck; Reza M Salek; David S Wishart
Journal:  J Proteome Res       Date:  2016-01-20       Impact factor: 4.466

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  4 in total

Review 1.  Advances in diagnostic tools for respiratory tract infections: from tuberculosis to COVID-19 - changing paradigms?

Authors:  Zoran Stojanovic; Filipe Gonçalves-Carvalho; Alicia Marín; Jorge Abad Capa; Jose Domínguez; Irene Latorre; Alicia Lacoma; Cristina Prat-Aymerich
Journal:  ERJ Open Res       Date:  2022-09-12

2.  Targeted metabolomics analysis of serum and Mycobacterium tuberculosis antigen-stimulated blood cultures of pediatric patients with active and latent tuberculosis.

Authors:  Druszczynska Magdalena; Seweryn Michal; Sieczkowska Marta; Kowalewska-Pietrzak Magdalena; Pankowska Anna; Godkowicz Magdalena; Szewczyk Rafał
Journal:  Sci Rep       Date:  2022-03-08       Impact factor: 4.379

3.  The regular pattern of metabolite changes in mushroom Inonotus hispidus in different growth periods and exploration of their indicator compounds.

Authors:  Zhijun Li; Haiying Bao; Chen Han; Mingjie Song
Journal:  Sci Rep       Date:  2022-08-23       Impact factor: 4.996

Review 4.  Towards Accurate Point-of-Care Tests for Tuberculosis in Children.

Authors:  Nina Vaezipour; Nora Fritschi; Noé Brasier; Sabine Bélard; José Domínguez; Marc Tebruegge; Damien Portevin; Nicole Ritz
Journal:  Pathogens       Date:  2022-03-08
  4 in total

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