Literature DB >> 17924839

Metabolic fingerprinting as a diagnostic tool.

David I Ellis1, Warwick B Dunn, Julian L Griffin, J William Allwood, Royston Goodacre.   

Abstract

Within the framework of systems biology, functional analyses at all 'omic levels have seen an intense level of activity during the first decade of the twenty-first century. These include genomics, transcriptomics, proteomics, metabolomics and lipidomics. It could be said that metabolomics offers some unique advantages over the other 'omics disciplines and one of the core approaches of metabolomics for disease diagnostics is metabolic fingerprinting. This review provides an overview of the main metabolic fingerprinting approaches used for disease diagnostics and includes: infrared and Raman spectroscopy, Nuclear magnetic resonance (NMR) spectroscopy, followed by an introduction to a wide range of novel mass spectrometry-based methods, which are currently under intense investigation and developmental activity in laboratories worldwide. It is hoped that this review will act as a springboard for researchers and clinicians across a wide range of disciplines in this exciting era of multidisciplinary and novel approaches to disease diagnostics.

Mesh:

Year:  2007        PMID: 17924839     DOI: 10.2217/14622416.8.9.1243

Source DB:  PubMed          Journal:  Pharmacogenomics        ISSN: 1462-2416            Impact factor:   2.533


  86 in total

Review 1.  Metabolomics as a tool for cardiac research.

Authors:  Julian L Griffin; Helen Atherton; John Shockcor; Luigi Atzori
Journal:  Nat Rev Cardiol       Date:  2011-09-20       Impact factor: 32.419

2.  Distinguishing cell types or populations based on the computational analysis of their infrared spectra.

Authors:  Francis L Martin; Jemma G Kelly; Valon Llabjani; Pierre L Martin-Hirsch; Imran I Patel; Júlio Trevisan; Nigel J Fullwood; Michael J Walsh
Journal:  Nat Protoc       Date:  2010-10-07       Impact factor: 13.491

3.  Metabolic profiling for the detection of bladder cancer.

Authors:  Que N Van; Timothy D Veenstra; Haleem J Issaq
Journal:  Curr Urol Rep       Date:  2011-02       Impact factor: 3.092

4.  Untargeted Tumor Metabolomics with Liquid Chromatography-Surface-Enhanced Raman Spectroscopy.

Authors:  Lifu Xiao; Chuanqi Wang; Chen Dai; Laurie E Littlepage; Jun Li; Zachary D Schultz
Journal:  Angew Chem Int Ed Engl       Date:  2020-01-27       Impact factor: 15.336

Review 5.  Metabolomics and malaria biology.

Authors:  Viswanathan Lakshmanan; Kyu Y Rhee; Johanna P Daily
Journal:  Mol Biochem Parasitol       Date:  2010-10-21       Impact factor: 1.759

Review 6.  Postgenomics diagnostics: metabolomics approaches to human blood profiling.

Authors:  Oxana Trifonova; Petr Lokhov; Alexander Archakov
Journal:  OMICS       Date:  2013-09-17

7.  Serum lipidomics in diagnostics of sarcoidosis.

Authors:  Beata Toczylowska; Dariusz Jastrzebski; Sabina Kostorz; Elzbieta Zieminska; Dariusz Ziora
Journal:  Sarcoidosis Vasc Diffuse Lung Dis       Date:  2018-04-28       Impact factor: 0.670

8.  Protein identification and quantification by two-dimensional infrared spectroscopy: implications for an all-optical proteomic platform.

Authors:  Frédéric Fournier; Elizabeth M Gardner; Darek A Kedra; Paul M Donaldson; Rui Guo; Sarah A Butcher; Ian R Gould; Keith R Willison; David R Klug
Journal:  Proc Natl Acad Sci U S A       Date:  2008-10-01       Impact factor: 11.205

9.  Protein Bioinformatics Infrastructure for the Integration and Analysis of Multiple High-Throughput "omics" Data.

Authors:  Chuming Chen; Peter B McGarvey; Hongzhan Huang; Cathy H Wu
Journal:  Adv Bioinformatics       Date:  2010-03-29

10.  High-Throughput Omics Technologies: Potential Tools for the Investigation of Influences of EMF on Biological Systems.

Authors:  M Blankenburg; L Haberland; H-D Elvers; C Tannert; B Jandrig
Journal:  Curr Genomics       Date:  2009-04       Impact factor: 2.236

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