| Literature DB >> 34097045 |
Ge Liu1, Mingjian Shi1, Jonathan D Mosley1,2, Chunhua Weng3, Yanfei Zhang4,5, Ming Ta Michael Lee4,5, Gail P Jarvik6,7, Hakon Hakonarson8,9,10,11, Bahram Namjou-Khales12, Patrick Sleiman8,9,10, Yuan Luo13, Frank Mentch8, Joshua C Denny1,14,15,16, MacRae F Linton17,18, Wei-Qi Wei1, C Michael Stein2,18, QiPing Feng2.
Abstract
Importance: Observational studies suggest that statins, which inhibit 3-hydroxy-3-methylglutaryl coenzyme A (HMG-CoA) reductase, may be associated with beneficial effects in many noncardiovascular diseases. Objective: To construct a weighted HMG-CoA reductase (HMGCR) gene genetic risk score (GRS) using variants in the HMGCR gene affecting low-density lipoprotein cholesterol as an instrumental variable for mendelian randomization analyses to test associations with candidate noncardiovascular phenotypes previously associated with statin use in observational studies. Design, Setting, and Participants: This cohort study included 53 385 unrelated adults of European ancestry with genome-wide genotypes available from BioVU (a practice-based biobank, used for discovery) and 30 444 unrelated adults with European ancestry available in the Electronic Medical Records and Genomics (eMERGE; a research consortium that conducts genetic research using electronic medical records, used for replication). The study was conducted from February 6, 2015, through April 31, 2019; data analysis was performed from August 26, 2019, through December 22, 2020. Interventions: An HMGCR GRS was calculated. Main Outcomes and Measures: The association between the HMGCR GRS and the presence or absence of 22 noncardiovascular phenotypes previously associated with statin use in clinical studies.Entities:
Mesh:
Substances:
Year: 2021 PMID: 34097045 PMCID: PMC8185593 DOI: 10.1001/jamanetworkopen.2021.12820
Source DB: PubMed Journal: JAMA Netw Open ISSN: 2574-3805
Cohort Demographic Characteristics
| Characteristic | Patients, mean (SD) | |
|---|---|---|
| BioVU (n = 53 385) | eMERGE (n = 30 444) | |
| Sex, No. (%) | ||
| Women | 29 958 (56.11) | 16 736 (55.0) |
| Men | 23 427 (43.89) | 13 708 (45.0) |
| Age, y | 59.93 (15.61) | 68.65 (15.43) |
| EHR length, y | 10.24 (7.01) | 17.11 (9.89) |
| Statin therapy, No. (%) of patients | 25 625 (48.0) | 16 060 (52.8) |
Abbreviations: BioVU, biobank at Vanderbilt University; EHR, electronic health record; eMERGE, Electronic Medical Records and Genomics network.
Findings for HMGCR Genetic Risk Score and Candidate Noncardiovascular Phenotypes in the Biobank at Vanderbilt University
| PheCode | Description | Odds ratio (95% CI) | No. (%) | |||
|---|---|---|---|---|---|---|
| Total | Cases | Controls | ||||
| 250.2 | Type 2 diabetes | 1.10 (1.04-1.15) | 5.58 × 10−4 | 47 757 | 9210 (19.3) | 38 547 (80.7) |
| 332 | Parkinson disease | 1.30 (1.07-1.58) | .007 | 41 193 | 553 (1.3) | 40 640 (98.7) |
| 585.32 | Kidney disease | 1.18 (1.05-1.34) | .008 | 39 811 | 1308 (3.3) | 38 503 (96.7) |
| 772.4 | Rhabdomyolysis | 1.38 (0.96-1.97) | .08 | 46 140 | 159 (0.3) | 45 981 (99.7) |
| 202.2 | Non-Hodgkin lymphoma | 1.21 (0.96-1.52) | .11 | 51 062 | 367 (0.7) | 50 695 (99.3) |
| 151 | Cancer of stomach | 0.86 (0.71-1.05) | .13 | 45 818 | 509 (1.1) | 45 309 (98.9) |
| 800.1 | Fracture of neck or femur | 1.11 (0.93-1.31) | .24 | 45 613 | 679 (1.5) | 44 934 (98.5) |
| 770 | Myalgia and myositis, unspecified | 1.05 (0.96-1.13) | .28 | 50 460 | 3202 (6.3) | 47 258 (93.7) |
| 185 | Cancer of prostate | 0.94 (0.84-1.06) | .31 | 18 262 | 1786 (9.8) | 16 476 (90.2) |
| 577.1 | Acute pancreatitis | 1.09 (0.91-1.31) | .33 | 51 731 | 596 (1.2) | 51 135 (98.8) |
| 38 | Septicemia | 1.04 (0.96-1.13) | .38 | 46 724 | 3049 (6.5) | 43 675 (93.5) |
| 634 | Miscarriage; stillbirth | 0.88 (0.65-1.18) | .39 | 27 815 | 234 (0.8) | 27 581 (99.2) |
| 8.52 | Intestinal infection due to | 0.94 (0.79-1.10) | .43 | 51 807 | 672 (1.3) | 51 135 (98.7) |
| 585.1 | Acute kidney failure | 1.02 (0.96-1.09) | .46 | 44 949 | 6446 (14.3) | 38 503 (85.7) |
| 70.3 | Viral hepatitis C | 0.96 (0.85-1.10) | .58 | 44 776 | 1168 (2.6) | 43 608 (97.4) |
| 366.2 | Senile cataract | 1.02 (0.95-1.09) | .67 | 50 734 | 4469 (8.8) | 46 265 (91.2) |
| 290.1 | Dementias | 1.03 (0.89-1.20) | .68 | 42 515 | 890 (2.1) | 41 625 (97.9) |
| 153.2 | Colon cancer | 0.98 (0.88-1.10) | .77 | 43 091 | 1510 (3.5) | 41 581 (96.5) |
| 38.3 | Bacteremia | 0.99 (0.89-1.10) | .83 | 45 543 | 1868 (4.1) | 43 675 (95.9) |
| 155.1 | Malignant neoplasm of liver, primary | 1.02 (0.83-1.25) | .84 | 45 770 | 461 (1.0) | 45 309 (99.0) |
| 359.2 | Myopathy | 0.99 (0.86-1.13) | .86 | 47 572 | 1028 (2.2) | 46 544 (97.8) |
| 743.11 | Osteoporosis | 1.00 (0.92-1.08) | .97 | 45 863 | 3410 (7.4) | 42 453 (92.6) |
The analyses were adjusted for sex, age at most recent visit, electronic health record length, and 10 principal components for ancestry. Cancer of the prostate was analyzed only in men; miscarriage or stillbirth was analyzed only in women. The HMGCR GRS was standardized for a decrement of 10 mg/dL in the low-density lipoprotein cholesterol level (to convert to millimoles per liter, multiply by 0.0259).
Figure. Association Between HMGCR Genetic Risk Score (GRS) Quartiles and Candidate Phenotypes
aIndividuals in the lowest estimated LDL-C level quartile were more likely to have diseases.
Findings Between HMGCR Genetic Risk Score and Candidate Phenotypes in Electronic Medical Records and Genomics Network
| PheCode | Description | Odds ratio (95% CI) | No. | ||
|---|---|---|---|---|---|
| Cases | Controls | ||||
| 250.2 | Type 2 diabetes | .02 | 1.09 (1.01-1.17) | 6877 | 17 920 |
| 585.32 | Kidney failure | .08 | 1.18 (0.98-1.41) | 858 | 18 355 |
| 332 | Parkinson disease | .53 | 0.93 (0.75-1.16) | 538 | 19 330 |
The analyses were adjusted for sex, age at most recent visit, electronic health record length, and 5 principal components for ancestry. The HMGCR GRS was standardized for a decrement of 10 mg/dL in the low-density lipoprotein cholesterol level (to convert to millimoles per liter, multiply by 0.0259).