| Literature DB >> 34094492 |
Mikhail V Polynski1,2, Mariia D Sapova1, Valentine P Ananikov1,2.
Abstract
The unique reactivity of the acetylenic unit inEntities:
Year: 2020 PMID: 34094492 PMCID: PMC8163204 DOI: 10.1039/d0sc04752j
Source DB: PubMed Journal: Chem Sci ISSN: 2041-6520 Impact factor: 9.825
Fig. 1The core methodology and software used to perform the calculations outlined in Fig. 2.
Fig. 2Thermodynamic model: direct CaC2 solvation in DMSO vs. partial hydrolysis in the water/DMSO system (hydrolytic solubilization). The heterogeneity of CaC2 was accounted for by considering two polymorphs with fractions equal to their Boltzmann weights (Q).
Fig. 3Radial distribution functions in the [Ca2+][C22−]/DMSO (a–c) and HCC–Ca–OH/DMSO (d–f) systems. Time evolution of the interatomic distances is shown in (a), (b), (d) and (e); (a) and (d) depict the evolution in the equilibration runs, (b) corresponds to the simulated annealing run, and (d) corresponds to the sampling NPT run. Equilibrated structures of the Ca2+ solvation sphere are shown in (c) and (f). In (c), the RDFs in the last 5 ps of the run (b) are shown (cooled to 300 K after the annealing); in (f), the RDFs in the whole run (e) are depicted. Integral functions I(r) show the time-averaged CN of Ca2+. For clarity, the structural formula is shown only for one solvent molecule. Other solvent molecules are abbreviated as DMSO; they are also coordinated via O atoms.
Fig. 4Optimized structures of conformers: [(DMSO)4Ca(CC)] (top) and [(DMSO)4Ca(CCH)(OH)] (bottom). Relative Gibbs energies and Boltzmann weights at 300 K are given below the structures. The most abundant conformers iso1 and iso3 are depicted with marked close noncovalent C(sp)–H and O–H contacts. Note that the sum of the van der Waals radii for the C(sp)–H and O–H contacts is 2.88 and 2.62 Å, according to Bondi.[70]
Hydration of Ca2+a
| Transformation | Δ |
|---|---|
| Ca(g.)2+ + 7H2O(g.) ⇌ [Ca(H2O)7](g.)2+ | −205.6 |
| [Ca(H2O)7](g.)2+ ⇌ [Ca(H2O)7](aq.)2+ | −181.9 |
| Ca(g.)2+ + 7H2O(g.) ⇌ [Ca(H2O)7](aq.)2+ | −387.5 |
| Experimental reference | −386.2 ( |
| Classical (non-quantum) electrostatic models | −377.3,[ |
The binding of H2O to Ca2+ was modeled at the RIJK-PBE0-D3(BJ)/def2-TZVP-gCP level; the hydration was modeled using SMD (M06-2X/6-31+G**).
Summary: the unfavorable CaC2 solvation vs. protolysis-assisted solubilization of CaC2a
| Transformation | Δ |
|---|---|
|
| |
| CaC2(s.) ⇌ [Ca2+][C22−](g.) | Δ |
| [Ca2+][C22−](g.) + DMSO(g.) ⇌ [(DMSO)4Ca(C | Δ |
| [(DMSO)4Ca(C | Δ |
| CaC2(s.) ⇌ CaC2(solv.) (same as [(DMSO)4Ca(C | Δ |
|
| |
| [Ca2+][C22−](g.) ⇌ HC | Δ |
| HC | Δ |
| [(DMSO)4Ca(C | Δ |
| CaC2(s.) ⇌ HC | Δ |
Gas-phase thermochemistry was modeled at the PBE0-D3(BJ)/pob-TZVP-gCP level; bulk solvent effects were modeled using SMD (M06-2X/6-31+G**).
Acidity in DMSO
| Transformation | Δ | Calculated p | Reference p | Deviation |
|---|---|---|---|---|
| HC | 34.2 | 25.1 | 29.7[ | −4.6 |
| HC | 50.6 | 37.1 | — | |
| PhC≡CH(solv.) ⇌ PhC≡C(solv.)− + H(solv.)+ | 34.6 | 25.4 | 28.7[ | −3.6 |
| H2O(solv.) ⇌ HO(solv.)− + H(solv.)+ | 48.8 | 35.8 | 31.4[ | 4.4 |
| CH3S(O)CH3(solv.) ⇌ CH3S(O)CH2(solv.)− + H(solv.)+ | 50.5 | 37.0 | 35.1[ | 1.9 |
Between calculated and reference values.
The Gibbs free energy of a proton in DMSO is taken as the sum of G in the gas phase at 298.15 K and 1 atm (ref. 87) and ΔGsolv of H+ in DMSO.[88]
Scheme 1The unfavorable process of the HCC− protonation by a DMSO molecule from the first solvation shell. All DMSO molecules are coordinated via O atoms.