Literature DB >> 23947824

Geometrical correction for the inter- and intramolecular basis set superposition error in periodic density functional theory calculations.

Jan Gerit Brandenburg1, Maristella Alessio, Bartolomeo Civalleri, Michael F Peintinger, Thomas Bredow, Stefan Grimme.   

Abstract

We extend the previously developed geometrical correction for the inter- and intramolecular basis set superposition error (gCP) to periodic density functional theory (DFT) calculations. We report gCP results compared to those from the standard Boys-Bernardi counterpoise correction scheme and large basis set calculations. The applicability of the method to molecular crystals as the main target is tested for the benchmark set X23. It consists of 23 noncovalently bound crystals as introduced by Johnson et al. (J. Chem. Phys. 2012, 137, 054103) and refined by Tkatchenko et al. (J. Chem. Phys. 2013, 139, 024705). In order to accurately describe long-range electron correlation effects, we use the standard atom-pairwise dispersion correction scheme DFT-D3. We show that a combination of DFT energies with small atom-centered basis sets, the D3 dispersion correction, and the gCP correction can accurately describe van der Waals and hydrogen-bonded crystals. Mean absolute deviations of the X23 sublimation energies can be reduced by more than 70% and 80% for the standard functionals PBE and B3LYP, respectively, to small residual mean absolute deviations of about 2 kcal/mol (corresponding to 13% of the average sublimation energy). As a further test, we compute the interlayer interaction of graphite for varying distances and obtain a good equilibrium distance and interaction energy of 6.75 Å and -43.0 meV/atom at the PBE-D3-gCP/SVP level. We fit the gCP scheme for a recently developed pob-TZVP solid-state basis set and obtain reasonable results for the X23 benchmark set and the potential energy curve for water adsorption on a nickel (110) surface.

Entities:  

Year:  2013        PMID: 23947824     DOI: 10.1021/jp406658y

Source DB:  PubMed          Journal:  J Phys Chem A        ISSN: 1089-5639            Impact factor:   2.781


  11 in total

1.  On the hydrogen activation by frustrated Lewis pairs in the solid state: benchmark studies and theoretical insights.

Authors:  Lei Liu; Jan Gerit Brandenburg; Stefan Grimme
Journal:  Philos Trans A Math Phys Eng Sci       Date:  2017-08-28       Impact factor: 4.226

2.  Impact of dihydrogen bonding on lattice energies and sublimation enthalpies of crystalline [H2GaNH2]3, [H2BNH2]3 and [H2GeCH2]3.

Authors:  Wayne L Gladfelter; Christopher J Cramer
Journal:  RSC Adv       Date:  2019-09-17       Impact factor: 4.036

Review 3.  Small Atomic Orbital Basis Set First-Principles Quantum Chemical Methods for Large Molecular and Periodic Systems: A Critical Analysis of Error Sources.

Authors:  Rebecca Sure; Jan Gerit Brandenburg; Stefan Grimme
Journal:  ChemistryOpen       Date:  2015-11-25       Impact factor: 2.911

4.  Activity coefficients of binary methanol alcohol mixtures from cluster weighting.

Authors:  Gwydyon Marchelli; J Ingenmey; B Kirchner
Journal:  ChemistryOpen       Date:  2020-07-23       Impact factor: 2.911

5.  Combined X-ray Crystallographic, IR/Raman Spectroscopic, and Periodic DFT Investigations of New Multicomponent Crystalline Forms of Anthelmintic Drugs: A Case Study of Carbendazim Maleate.

Authors:  Alexander P Voronin; Artem O Surov; Andrei V Churakov; Olga D Parashchuk; Alexey A Rykounov; Mikhail V Vener
Journal:  Molecules       Date:  2020-05-21       Impact factor: 4.411

6.  Investigation of the cis-trans structures and isomerization of oligoprolines by using Raman spectroscopy and density functional theory calculations: solute-solvent interactions and effects of terminal positively charged amino acid residues.

Authors:  Mei-Chun Huang; Wei-Hao Chen; Chen-Wei Huang; Kuei-Yen Huang; Jia-Cherng Horng; Michitoshi Hayashi; I-Chia Chen
Journal:  RSC Adv       Date:  2020-09-17       Impact factor: 4.036

7.  Solving the enigma of weak fluorine contacts in the solid state: a periodic DFT study of fluorinated organic crystals.

Authors:  Elena O Levina; Ivan Y Chernyshov; Alexander P Voronin; Leonid N Alekseiko; Adam I Stash; Mikhail V Vener
Journal:  RSC Adv       Date:  2019-04-23       Impact factor: 4.036

8.  Understanding the solubilization of Ca acetylide with a new computational model for ionic pairs.

Authors:  Mikhail V Polynski; Mariia D Sapova; Valentine P Ananikov
Journal:  Chem Sci       Date:  2020-10-08       Impact factor: 9.825

9.  Plausible Pnicogen Bonding of epi-Cinchonidine as a Chiral Scaffold in Catalysis.

Authors:  Zakir Ullah; Kang Kim; Arramshetti Venkanna; Hye Su Kim; Moon Il Kim; Mi-Hyun Kim
Journal:  Front Chem       Date:  2021-07-06       Impact factor: 5.221

10.  Polycyclic Aromatic Hydrocarbons Adsorption onto Graphene: A DFT and AIMD Study.

Authors:  Bing Li; Pengfei Ou; Yulan Wei; Xu Zhang; Jun Song
Journal:  Materials (Basel)       Date:  2018-05-03       Impact factor: 3.623

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.