Literature DB >> 34050019

Attaining the promise of plant gene editing at scale.

Ryan A Nasti1, Daniel F Voytas2.   

Abstract

Crop improvement relies heavily on genetic variation that arises spontaneously through mutation. Modern breeding methods are very adept at combining this genetic variation in ways that achieve remarkable improvements in plant performance. Novel traits have also been created through mutation breeding and transgenesis. The advent of gene editing, however, marks a turning point: With gene editing, synthetic variation will increasingly supplement and, in some cases, supplant the genetic variation that occurs naturally. We are still in the very early stages of realizing the opportunity provided by plant gene editing. At present, typically only one or a few genes are targeted for mutation at a time, and most mutations result in loss of gene function. New technological developments, however, promise to make it possible to perform gene editing at scale. RNA virus vectors, for example, can deliver gene-editing reagents to the germ line through infection and create hundreds to thousands of diverse mutations in the progeny of infected plants. With developmental regulators, edited somatic cells can be induced to form meristems that yield seed-producing shoots, thereby increasing throughput and shrinking timescales for creating edited plants. As these approaches are refined and others developed, they will allow for accelerated breeding, the domestication of orphan crops and the reengineering of metabolism in a more directed manner than has ever previously been possible.

Entities:  

Keywords:  crop improvement; gene editing; plant breeding

Year:  2021        PMID: 34050019      PMCID: PMC8179185          DOI: 10.1073/pnas.2004846117

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  65 in total

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3.  Multiplexed Gene Editing and Protein Overexpression Using a Tobacco mosaic virus Viral Vector.

Authors:  Will B Cody; Herman B Scholthof; T Erik Mirkov
Journal:  Plant Physiol       Date:  2017-06-29       Impact factor: 8.340

4.  Engineering Quantitative Trait Variation for Crop Improvement by Genome Editing.

Authors:  Daniel Rodríguez-Leal; Zachary H Lemmon; Jarrett Man; Madelaine E Bartlett; Zachary B Lippman
Journal:  Cell       Date:  2017-09-14       Impact factor: 41.582

5.  Multiplexed heritable gene editing using RNA viruses and mobile single guide RNAs.

Authors:  Evan E Ellison; Ugrappa Nagalakshmi; Maria Elena Gamo; Pin-Jui Huang; Savithramma Dinesh-Kumar; Daniel F Voytas
Journal:  Nat Plants       Date:  2020-06-01       Impact factor: 15.793

6.  Mutagenesis as a tool in plant genetics, functional genomics, and breeding.

Authors:  Per Sikora; Aakash Chawade; Mikael Larsson; Johanna Olsson; Olof Olsson
Journal:  Int J Plant Genomics       Date:  2012-01-22

Review 7.  Plant genome editing with TALEN and CRISPR.

Authors:  Aimee Malzahn; Levi Lowder; Yiping Qi
Journal:  Cell Biosci       Date:  2017-04-24       Impact factor: 7.133

8.  Rapid genotype "independent" Zea mays L. (maize) transformation via direct somatic embryogenesis.

Authors:  Keith Lowe; Mauricio La Rota; George Hoerster; Craig Hastings; Ning Wang; Mark Chamberlin; Emily Wu; Todd Jones; William Gordon-Kamm
Journal:  In Vitro Cell Dev Biol Plant       Date:  2018-04-30       Impact factor: 2.252

9.  The Impacts of Oil Palm on Recent Deforestation and Biodiversity Loss.

Authors:  Varsha Vijay; Stuart L Pimm; Clinton N Jenkins; Sharon J Smith
Journal:  PLoS One       Date:  2016-07-27       Impact factor: 3.240

10.  CRISPR C-to-G base editors for inducing targeted DNA transversions in human cells.

Authors:  Ibrahim C Kurt; Ronghao Zhou; Sowmya Iyer; Sara P Garcia; Bret R Miller; Lukas M Langner; Julian Grünewald; J Keith Joung
Journal:  Nat Biotechnol       Date:  2020-07-20       Impact factor: 54.908

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  14 in total

1.  Genetic basis of a spontaneous mutation's expressivity.

Authors:  Rachel Schell; Joseph J Hale; Martin N Mullis; Takeshi Matsui; Ryan Foree; Ian M Ehrenreich
Journal:  Genetics       Date:  2022-03-03       Impact factor: 4.562

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Authors:  Shaun Curtin; Yiping Qi; Lázaro E P Peres; Alisdair R Fernie; Agustin Zsögön
Journal:  Plant Physiol       Date:  2022-03-28       Impact factor: 8.340

3.  Lessons for a SECURE Future: Evaluating Diversity in Crop Biotechnology Across Regulatory Regimes.

Authors:  Dalton R George; Eli D Hornstein; Carrie A Clower; Allison L Coomber; DeShae Dillard; Nassib Mugwanya; Daniela T Pezzini; Casey Rozowski
Journal:  Front Bioeng Biotechnol       Date:  2022-05-02

4.  Carbon Nanotube-Mediated Plasmid DNA Delivery in Rice Leaves and Seeds.

Authors:  Tia Dunbar; Nikolaos Tsakirpaloglou; Endang M Septiningsih; Michael J Thomson
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Review 5.  Potential of Genome Editing to Capture Diversity From Australian Wild Rice Relatives.

Authors:  Muhammad Abdullah; Pauline Okemo; Agnelo Furtado; Robert Henry
Journal:  Front Genome Ed       Date:  2022-04-27

6.  Life 2.0-A CRISPR path to a sustainable planet.

Authors:  Dana Carroll; Barbara J Meyer
Journal:  Proc Natl Acad Sci U S A       Date:  2021-06-01       Impact factor: 11.205

Review 7.  Non-GM Genome Editing Approaches in Crops.

Authors:  Zheng Gong; Ming Cheng; Jose R Botella
Journal:  Front Genome Ed       Date:  2021-12-15

Review 8.  Progress of Genomics-Driven Approaches for Sustaining Underutilized Legume Crops in the Post-Genomic Era.

Authors:  Uday Chand Jha; Harsh Nayyar; Swarup K Parida; Melike Bakır; Eric J B von Wettberg; Kadambot H M Siddique
Journal:  Front Genet       Date:  2022-04-07       Impact factor: 4.772

9.  Multiplex knockout of trichome-regulating MYB duplicates in hybrid poplar using a single gRNA.

Authors:  William P Bewg; Scott A Harding; Nancy L Engle; Brajesh N Vaidya; Ran Zhou; Jacob Reeves; Thomas W Horn; Nirmal Joshee; Jerry W Jenkins; Shengqiang Shu; Kerrie W Barry; Yuko Yoshinaga; Jane Grimwood; Robert J Schmitz; Jeremy Schmutz; Timothy J Tschaplinski; Chung-Jui Tsai
Journal:  Plant Physiol       Date:  2022-06-01       Impact factor: 8.005

10.  Principles of Nanoparticle Design for Genome Editing in Plants.

Authors:  Pushkal Sharma; Tedrick Thomas Salim Lew
Journal:  Front Genome Ed       Date:  2022-03-07
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