Literature DB >> 34049447

Tri-Clustering Dynamic Functional Network Connectivity Identifies Significant Schizophrenia Effects Across Multiple States in Distinct Subgroups of Individuals.

Md Abdur Rahaman1,2, Eswar Damaraju2, Jessica A Turner2, Theo G M van Erp3,4, Daniel Mathalon5, Jatin Vaidya6, Bryon Muller7, Godfrey Pearlson8, Vince D Calhoun1,2.   

Abstract

Background: Brain imaging data collected from individuals are highly complex with unique variation; however, such variation is typically ignored in approaches that focus on group averages or even supervised prediction. State-of-the-art methods for analyzing dynamic functional network connectivity (dFNC) subdivide the entire time course into several (possibly overlapping) connectivity states (i.e., sliding window clusters). However, such an approach does not factor in the homogeneity of underlying data and may result in a less meaningful subgrouping of the data set.
Methods: Dynamic-N-way tri-clustering (dNTiC) incorporates a homogeneity benchmark to approximate clusters that provide a more "apples-to-apples" comparison between groups within analogous subsets of time-space and subjects. dNTiC sorts the dFNC states by maximizing similarity across individuals and minimizing variance among the pairs of components within a state.
Results: Resulting tri-clusters show significant differences between schizophrenia (SZ) and healthy control (HC) in distinct brain regions. Compared with HC subjects, SZ show hypoconnectivity (low positive) among subcortical, default mode, cognitive control, but hyperconnectivity (high positive) between sensory networks in most tri-clusters. In tri-cluster 3, HC subjects show significantly stronger connectivity among sensory networks and anticorrelation between subcortical and sensory networks than SZ. Results also provide a statistically significant difference in SZ and HC subject's reoccurrence time for two distinct dFNC states. Conclusions: Outcomes emphasize the utility of the proposed method for characterizing and leveraging variance within high-dimensional data to enhance the interpretability and sensitivity of measurements in studying a heterogeneous disorder such as SZ and unconstrained experimental conditions as resting functional magnetic resonance imaging. Impact statement The current methods for analyzing dynamic functional network connectivity (dFNC) run k-means on a collection of dFNC windows, and each window includes all the pairs of independent component analysis networks. As such, it depicts a short-time connectivity pattern of the entire brain, and the k-means clusters fixed-length signatures that have an extent throughout the neural system. Consequently, there is a chance of missing connectivity signatures that span across a smaller subset of pairs. Dynamic-N-way tri-clustering further sorts the dFNC states by maximizing similarity across individuals, minimizing variance among the pairs of components within a state, and reporting more complex and transient patterns.

Entities:  

Keywords:  ICA; dFNC states; dynamic functional network connectivity; resting-state fMRI; schizophrenia; tri-clustering

Mesh:

Year:  2021        PMID: 34049447      PMCID: PMC8867091          DOI: 10.1089/brain.2020.0896

Source DB:  PubMed          Journal:  Brain Connect        ISSN: 2158-0014


  48 in total

1.  Network modelling methods for FMRI.

Authors:  Stephen M Smith; Karla L Miller; Gholamreza Salimi-Khorshidi; Matthew Webster; Christian F Beckmann; Thomas E Nichols; Joseph D Ramsey; Mark W Woolrich
Journal:  Neuroimage       Date:  2010-09-15       Impact factor: 6.556

2.  Brain Heterogeneity in Schizophrenia and Its Association With Polygenic Risk.

Authors:  Dag Alnæs; Tobias Kaufmann; Dennis van der Meer; Aldo Córdova-Palomera; Jaroslav Rokicki; Torgeir Moberget; Francesco Bettella; Ingrid Agartz; Deanna M Barch; Alessandro Bertolino; Christine L Brandt; Simon Cervenka; Srdjan Djurovic; Nhat Trung Doan; Sarah Eisenacher; Helena Fatouros-Bergman; Lena Flyckt; Annabella Di Giorgio; Beathe Haatveit; Erik G Jönsson; Peter Kirsch; Martina J Lund; Andreas Meyer-Lindenberg; Giulio Pergola; Emanuel Schwarz; Olav B Smeland; Tiziana Quarto; Mathias Zink; Ole A Andreassen; Lars T Westlye
Journal:  JAMA Psychiatry       Date:  2019-07-01       Impact factor: 21.596

3.  Dynamic Functional Connectivity States Reflecting Psychotic-like Experiences.

Authors:  Anita D Barber; Martin A Lindquist; Pamela DeRosse; Katherine H Karlsgodt
Journal:  Biol Psychiatry Cogn Neurosci Neuroimaging       Date:  2017-09-28

Review 4.  Imaging human EEG dynamics using independent component analysis.

Authors:  Julie Onton; Marissa Westerfield; Jeanne Townsend; Scott Makeig
Journal:  Neurosci Biobehav Rev       Date:  2006-08-14       Impact factor: 8.989

5.  The positive and negative syndrome scale (PANSS) for schizophrenia.

Authors:  S R Kay; A Fiszbein; L A Opler
Journal:  Schizophr Bull       Date:  1987       Impact factor: 9.306

6.  Resting-state thalamic dysconnectivity in schizophrenia and relationships with symptoms.

Authors:  J Ferri; J M Ford; B J Roach; J A Turner; T G van Erp; J Voyvodic; A Preda; A Belger; J Bustillo; D O'Leary; B A Mueller; K O Lim; S C McEwen; V D Calhoun; M Diaz; G Glover; D Greve; C G Wible; J G Vaidya; S G Potkin; D H Mathalon
Journal:  Psychol Med       Date:  2018-02-15       Impact factor: 7.723

7.  Dynamic functional connectivity of the default mode network tracks daydreaming.

Authors:  Aaron Kucyi; Karen D Davis
Journal:  Neuroimage       Date:  2014-06-25       Impact factor: 6.556

8.  Identifying dynamic functional connectivity biomarkers using GIG-ICA: Application to schizophrenia, schizoaffective disorder, and psychotic bipolar disorder.

Authors:  Yuhui Du; Godfrey D Pearlson; Dongdong Lin; Jing Sui; Jiayu Chen; Mustafa Salman; Carol A Tamminga; Elena I Ivleva; John A Sweeney; Matcheri S Keshavan; Brett A Clementz; Juan Bustillo; Vince D Calhoun
Journal:  Hum Brain Mapp       Date:  2017-03-10       Impact factor: 5.038

9.  Dynamic functional connectivity analysis reveals transient states of dysconnectivity in schizophrenia.

Authors:  E Damaraju; E A Allen; A Belger; J M Ford; S McEwen; D H Mathalon; B A Mueller; G D Pearlson; S G Potkin; A Preda; J A Turner; J G Vaidya; T G van Erp; V D Calhoun
Journal:  Neuroimage Clin       Date:  2014-07-24       Impact factor: 4.881

10.  Dynamic functional network connectivity discriminates mild traumatic brain injury through machine learning.

Authors:  Victor M Vergara; Andrew R Mayer; Kent A Kiehl; Vince D Calhoun
Journal:  Neuroimage Clin       Date:  2018-03-15       Impact factor: 4.881

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  2 in total

Review 1.  Data-driven approaches to neuroimaging biomarkers for neurological and psychiatric disorders: emerging approaches and examples.

Authors:  Vince D Calhoun; Godfrey D Pearlson; Jing Sui
Journal:  Curr Opin Neurol       Date:  2021-08-01       Impact factor: 6.283

2.  Statelets: Capturing recurrent transient variations in dynamic functional network connectivity.

Authors:  Md Abdur Rahaman; Eswar Damaraju; Debbrata K Saha; Sergey M Plis; Vince D Calhoun
Journal:  Hum Brain Mapp       Date:  2022-03-11       Impact factor: 5.399

  2 in total

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