Literature DB >> 34027416

Large-Scale Identification of Clonal Hematopoiesis and Mutations Recurrent in Blood Cancers.

Julie E Feusier1,2, Sasi Arunachalam1,3,4, Tsewang Tashi3,5,6, Monika J Baker1, Chad VanSant-Webb1, Amber Ferdig1, Bryan E Welm3,7, Juan L Rodriguez-Flores8, Christopher Ours1, Lynn B Jorde2, Josef T Prchal3,5,6, Clinton C Mason9.   

Abstract

Clonal hematopoiesis of indeterminate potential (CHIP) is characterized by detectable hematopoietic-associated gene mutations in a person without evidence of hematologic malignancy. We sought to identify additional cancer-presenting mutations useable for CHIP detection by performing a data mining analysis of 48 somatic mutation studies reporting mutations at diagnoses of 7,430 adult and pediatric patients with hematologic malignancies. Following extraction of 20,141 protein-altering mutations, we identified 434 significantly recurrent mutation hotspots, 364 of which occurred at loci confidently assessable for CHIP. We then performed an additional large-scale analysis of whole exome sequencing data from 4,538 persons belonging to three non-cancer cohorts for clonal mutations. We found the combined cohort prevalence of CHIP with mutations identical to those reported at blood cancer mutation hotspots to be 1.8%, and that some of these CHIP mutations occurred in children. Our findings may help to improve CHIP detection and pre-cancer surveillance for both children and adults.

Entities:  

Keywords:  clonal hematopoiesis of indeterminate potential; mutational hotspot; oncogenesis; pre-cancer surveillance; recurrent mutation

Mesh:

Year:  2021        PMID: 34027416      PMCID: PMC8133376          DOI: 10.1158/2643-3230.BCD-20-0094

Source DB:  PubMed          Journal:  Blood Cancer Discov        ISSN: 2643-3230


  69 in total

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Journal:  Blood       Date:  2012-09-13       Impact factor: 22.113

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Authors:  Jane E Churpek; Khateriaa Pyrtel; Krishna-Latha Kanchi; Jin Shao; Daniel Koboldt; Christopher A Miller; Dong Shen; Robert Fulton; Michelle O'Laughlin; Catrina Fronick; Iskra Pusic; Geoffrey L Uy; Evan M Braunstein; Mark Levis; Julie Ross; Kevin Elliott; Sharon Heath; Allan Jiang; Peter Westervelt; John F DiPersio; Daniel C Link; Matthew J Walter; John Welch; Richard Wilson; Timothy J Ley; Lucy A Godley; Timothy A Graubert
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Authors:  Thomas McKerrell; Naomi Park; Thaidy Moreno; Carolyn S Grove; Hannes Ponstingl; Jonathan Stephens; Charles Crawley; Jenny Craig; Mike A Scott; Clare Hodkinson; Joanna Baxter; Roland Rad; Duncan R Forsyth; Michael A Quail; Eleftheria Zeggini; Willem Ouwehand; Ignacio Varela; George S Vassiliou
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Authors:  R Sood; N F Hansen; F X Donovan; B Carrington; D Bucci; B Maskeri; A Young; N S Trivedi; J Kohlschmidt; R M Stone; M A Caligiuri; S C Chandrasekharappa; G Marcucci; J C Mullikin; C D Bloomfield; P Liu
Journal:  Leukemia       Date:  2015-06-15       Impact factor: 11.528

8.  Characterisation of the genomic landscape of CRLF2-rearranged acute lymphoblastic leukemia.

Authors:  Lisa J Russell; Lisa Jones; Amir Enshaei; Stefano Tonin; Sarra L Ryan; Jeyanthy Eswaran; Sirintra Nakjang; Elli Papaemmanuil; Jose M C Tubio; Adele K Fielding; Ajay Vora; Peter J Campbell; Anthony V Moorman; Christine J Harrison
Journal:  Genes Chromosomes Cancer       Date:  2017-01-18       Impact factor: 5.006

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Journal:  Nat Genet       Date:  2017-07-03       Impact factor: 38.330

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