Literature DB >> 34011946

Linking genome size variation to population phenotypic variation within the rotifer, Brachionus asplanchnoidis.

Claus-Peter Stelzer1, Maria Pichler2, Anita Hatheuer2.   

Abstract

Eukaryotic organisms usually contain much more genomic DNA than expected from their biological complexity. In explaining this pattern, selection-based hypotheses suggest that genome size evolves through selection acting on correlated life history traits, implicitly assuming the existence of phenotypic effects of (extra) genomic DNA that are independent of its information content. Here, we present conclusive evidence of such phenotypic effects within a well-mixed natural population that shows heritable variation in genome size. We found that genome size is positively correlated with body size, egg size, and embryonic development time in a population of the monogonont rotifer Brachionus asplanchnoidis. The effect on embryonic development time was mediated partly by an indirect effect (via egg size), and a direct effect, the latter indicating an increased replication cost of the larger amounts of DNA during mitosis. Our results suggest that selection-based change of genome size can operate in this population, provided it is strong enough to overcome drift or mutational change of genome size.

Entities:  

Year:  2021        PMID: 34011946     DOI: 10.1038/s42003-021-02131-z

Source DB:  PubMed          Journal:  Commun Biol        ISSN: 2399-3642


  28 in total

1.  Intrapopulation genome size dynamics in Festuca pallens.

Authors:  Petr Smarda; Petr Bures; Lucie Horová; Olga Rotreklová
Journal:  Ann Bot       Date:  2008-08-05       Impact factor: 4.357

2.  Massive Changes of Genome Size Driven by Expansions of Non-autonomous Transposable Elements.

Authors:  Magali Naville; Simon Henriet; Ian Warren; Sara Sumic; Magnus Reeve; Jean-Nicolas Volff; Daniel Chourrout
Journal:  Curr Biol       Date:  2019-03-14       Impact factor: 10.834

3.  Patterns of genome size variation in snapping shrimp.

Authors:  Nicholas W Jeffery; Kristin Hultgren; Solomon Tin Chi Chak; T Ryan Gregory; Dustin R Rubenstein
Journal:  Genome       Date:  2016-04-19       Impact factor: 2.166

4.  Genome size evolution at the speciation level: the cryptic species complex Brachionus plicatilis (Rotifera).

Authors:  Claus-Peter Stelzer; Simone Riss; Peter Stadler
Journal:  BMC Evol Biol       Date:  2011-04-07       Impact factor: 3.260

5.  Massive genomic variation and strong selection in Arabidopsis thaliana lines from Sweden.

Authors:  Quan Long; Fernando A Rabanal; Dazhe Meng; Christian D Huber; Ashley Farlow; Alexander Platzer; Qingrun Zhang; Bjarni J Vilhjálmsson; Arthur Korte; Viktoria Nizhynska; Viktor Voronin; Pamela Korte; Laura Sedman; Terezie Mandáková; Martin A Lysak; Ümit Seren; Ines Hellmann; Magnus Nordborg
Journal:  Nat Genet       Date:  2013-06-23       Impact factor: 41.307

6.  Natural variation in genome architecture among 205 Drosophila melanogaster Genetic Reference Panel lines.

Authors:  Wen Huang; Andreas Massouras; Yutaka Inoue; Jason Peiffer; Miquel Ràmia; Aaron M Tarone; Lavanya Turlapati; Thomas Zichner; Dianhui Zhu; Richard F Lyman; Michael M Magwire; Kerstin Blankenburg; Mary Anna Carbone; Kyle Chang; Lisa L Ellis; Sonia Fernandez; Yi Han; Gareth Highnam; Carl E Hjelmen; John R Jack; Mehwish Javaid; Joy Jayaseelan; Divya Kalra; Sandy Lee; Lora Lewis; Mala Munidasa; Fiona Ongeri; Shohba Patel; Lora Perales; Agapito Perez; LingLing Pu; Stephanie M Rollmann; Robert Ruth; Nehad Saada; Crystal Warner; Aneisa Williams; Yuan-Qing Wu; Akihiko Yamamoto; Yiqing Zhang; Yiming Zhu; Robert R H Anholt; Jan O Korbel; David Mittelman; Donna M Muzny; Richard A Gibbs; Antonio Barbadilla; J Spencer Johnston; Eric A Stone; Stephen Richards; Bart Deplancke; Trudy F C Mackay
Journal:  Genome Res       Date:  2014-04-08       Impact factor: 9.043

7.  On causal roles and selected effects: our genome is mostly junk.

Authors:  W Ford Doolittle; Tyler D P Brunet
Journal:  BMC Biol       Date:  2017-12-05       Impact factor: 7.431

8.  Variation in genome size, cell and nucleus volume, chromosome number and rDNA loci among duckweeds.

Authors:  Phuong T N Hoang; Veit Schubert; Armin Meister; Jörg Fuchs; Ingo Schubert
Journal:  Sci Rep       Date:  2019-03-01       Impact factor: 4.379

9.  Within-Population Genome Size Variation is Mediated by Multiple Genomic Elements That Segregate Independently during Meiosis.

Authors:  Claus-Peter Stelzer; Maria Pichler; Peter Stadler; Anita Hatheuer; Simone Riss
Journal:  Genome Biol Evol       Date:  2019-12-01       Impact factor: 3.416

10.  Expansion of a single transposable element family is associated with genome-size increase and radiation in the genus Hydra.

Authors:  Wai Yee Wong; Oleg Simakov; Diane M Bridge; Paulyn Cartwright; Anthony J Bellantuono; Anne Kuhn; Thomas W Holstein; Charles N David; Robert E Steele; Daniel E Martínez
Journal:  Proc Natl Acad Sci U S A       Date:  2019-10-28       Impact factor: 12.779

View more
  4 in total

1.  The Genome of the Marine Rotifer Brachionus manjavacas: Genome-Wide Identification of 310 G Protein-Coupled Receptor (GPCR) Genes.

Authors:  Duck-Hyun Kim; Eunjin Byeon; Min-Sub Kim; Young Hwan Lee; Jun Chul Park; Atsushi Hagiwara; Jae-Seong Lee
Journal:  Mar Biotechnol (NY)       Date:  2022-03-09       Impact factor: 3.619

Review 2.  Programmed DNA elimination: silencing genes and repetitive sequences in somatic cells.

Authors:  Maxim V Zagoskin; Jianbin Wang
Journal:  Biochem Soc Trans       Date:  2021-11-01       Impact factor: 4.919

3.  Comparative analysis reveals within-population genome size variation in a rotifer is driven by large genomic elements with highly abundant satellite DNA repeat elements.

Authors:  C P Stelzer; J Blommaert; A M Waldvogel; M Pichler; B Hecox-Lea; D B Mark Welch
Journal:  BMC Biol       Date:  2021-09-16       Impact factor: 7.431

4.  Genome Size Variation Assessment in Vitis vinifera L. Landraces in Ibiza and Formentera (Balearic Islands).

Authors:  Raquel González; Joan Vallès; Teresa Garnatje
Journal:  Plants (Basel)       Date:  2022-07-21
  4 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.