Literature DB >> 33979545

Developments and Ongoing Challenges for Analysis of Surface-Bound Proteins.

Tobias Weidner1, David G Castner2.   

Abstract

Proteins at surfaces and interfaces play important roles in the function and performance of materials in applications ranging from diagnostic assays to biomedical devices. To improve the performance of these materials, detailed molecular structure (conformation and orientation) along with the identity and concentrations of the surface-bound proteins on those materials must be determined. This article describes radiolabeling, surface plasmon resonance, quartz crystal microbalance with dissipation, X-ray photoelectron spectroscopy, secondary ion mass spectrometry, sum frequency generation spectroscopy, and computational techniques along with the information each technique provides for characterizing protein films. A multitechnique approach using both experimental and computation methods is required for these investigations. Although it is now possible to gain much insight into the structure of surface-bound proteins, it is still not possible to obtain the same level of structural detail about proteins on surfaces as can be obtained about proteins in crystals and solutions, especially for large, complex proteins. However, recent results have shown it is possible to obtain detailed structural information (e.g., backbone and side chain orientation) about small peptides (5-20 amino sequences) on surfaces. Current studies are extending these investigations to small proteins such as protein G B1 (∼6 kDa). Approaches for furthering the capabilities for characterizing the molecular structure of surface-bound proteins are proposed.

Entities:  

Keywords:  SFG; ToF-SIMS; X-ray photoelectron spectroscopy; XPS; multitechnique analysis; protein structure; sum frequency generation; surface analysis; time-of-flight secondary ion mass spectrometry

Mesh:

Substances:

Year:  2021        PMID: 33979545      PMCID: PMC8522203          DOI: 10.1146/annurev-anchem-091520-010206

Source DB:  PubMed          Journal:  Annu Rev Anal Chem (Palo Alto Calif)        ISSN: 1936-1327            Impact factor:   12.400


  108 in total

1.  Molecular simulation of protein-surface interactions: benefits, problems, solutions, and future directions.

Authors:  Robert A Latour
Journal:  Biointerphases       Date:  2008-09       Impact factor: 2.456

2.  Proteins at interfaces probed by chiral vibrational sum frequency generation spectroscopy.

Authors:  Elsa C Y Yan; Zhuguang Wang; Li Fu
Journal:  J Phys Chem B       Date:  2015-01-21       Impact factor: 2.991

3.  How Size and Aggregation of Ice-Binding Proteins Control Their Ice Nucleation Efficiency.

Authors:  Yuqing Qiu; Arpa Hudait; Valeria Molinero
Journal:  J Am Chem Soc       Date:  2019-04-24       Impact factor: 15.419

4.  Antigen binding forces of single antilysozyme Fv fragments explored by atomic force microscopy.

Authors:  Alexandre Berquand; Nan Xia; David G Castner; Brian H Clare; Nicholas L Abbott; Vincent Dupres; Yasmine Adriaensen; Yves F Dufrêne
Journal:  Langmuir       Date:  2005-06-07       Impact factor: 3.882

5.  Toward a structure determination method for biomineral-associated protein using combined solid- state NMR and computational structure prediction.

Authors:  David L Masica; Jason T Ash; Moise Ndao; Gary P Drobny; Jeffrey J Gray
Journal:  Structure       Date:  2010-12-08       Impact factor: 5.006

6.  Tuning crystallization pathways through sequence engineering of biomimetic polymers.

Authors:  Xiang Ma; Shuai Zhang; Fang Jiao; Christina J Newcomb; Yuliang Zhang; Arushi Prakash; Zhihao Liao; Marcel D Baer; Christopher J Mundy; James Pfaendtner; Aleksandr Noy; Chun-Long Chen; James J De Yoreo
Journal:  Nat Mater       Date:  2017-04-17       Impact factor: 43.841

7.  The polyphenol EGCG inhibits amyloid formation less efficiently at phospholipid interfaces than in bulk solution.

Authors:  Maarten F M Engel; Corianne C vandenAkker; Michael Schleeger; Krassimir P Velikov; Gijsje H Koenderink; Mischa Bonn
Journal:  J Am Chem Soc       Date:  2012-08-27       Impact factor: 15.419

8.  XPS and ToF-SIMS investigation of alpha-helical and beta-strand peptide adsorption onto SAMs.

Authors:  Julia S Apte; Galen Collier; Robert A Latour; Lara J Gamble; David G Castner
Journal:  Langmuir       Date:  2010-03-02       Impact factor: 3.882

9.  Adsorption of proteins from plasma to a series of hydrophilic-hydrophobic copolymers. II. Compositional analysis with the prelabeled protein technique.

Authors:  T A Horbett
Journal:  J Biomed Mater Res       Date:  1981-09

10.  Ice-nucleating bacteria control the order and dynamics of interfacial water.

Authors:  Ravindra Pandey; Kota Usui; Ruth A Livingstone; Sean A Fischer; Jim Pfaendtner; Ellen H G Backus; Yuki Nagata; Janine Fröhlich-Nowoisky; Lars Schmüser; Sergio Mauri; Jan F Scheel; Daniel A Knopf; Ulrich Pöschl; Mischa Bonn; Tobias Weidner
Journal:  Sci Adv       Date:  2016-04-22       Impact factor: 14.136

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  1 in total

1.  Structure and Orientation of the SARS-Coronavirus-2 Spike Protein at Air-Water Interfaces.

Authors:  Mikkel Bregnhøj; Steven J Roeters; Adam S Chatterley; Fani Madzharova; Rolf Mertig; Jan Skov Pedersen; Tobias Weidner
Journal:  J Phys Chem B       Date:  2022-04-28       Impact factor: 3.466

  1 in total

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