Literature DB >> 30977366

How Size and Aggregation of Ice-Binding Proteins Control Their Ice Nucleation Efficiency.

Yuqing Qiu1, Arpa Hudait1, Valeria Molinero1.   

Abstract

Organisms that thrive at cold temperatures produce ice-binding proteins to manage the nucleation and growth of ice. Bacterial ice-nucleating proteins (INP) are typically large and form aggregates in the cell membrane, while insect hyperactive antifreeze proteins (AFP) are soluble and generally small. Experiments indicate that larger ice-binding proteins and their aggregates nucleate ice at warmer temperatures. Nevertheless, a quantitative understanding of how size and aggregation of ice-binding proteins determine the temperature Thet at which proteins nucleate ice is still lacking. Here, we address this question using molecular simulations and nucleation theory. The simulations indicate that the 2.5 nm long antifreeze protein TmAFP nucleates ice at 2 ± 1 °C above the homogeneous nucleation temperature, in good agreement with recent experiments. We predict that the addition of ice-binding loops to TmAFP increases Thet, but not enough to compete in efficiency with the bacterial INP. We implement an accurate procedure to determine Thet of surfaces of finite size using classical nucleation theory, and, after validating the theory against Thet of the proteins in molecular simulations, we use it to predict Thet of the INP of Ps. syringae as a function of the length and number of proteins in the aggregates. We conclude that assemblies with at most 34 INP already reach the Thet = -2 °C characteristic of this bacterium. Interestingly, we find that Thet is a strongly varying nonmonotonic function of the distance between proteins in the aggregates. This indicates that, to achieve maximum freezing efficiency, bacteria must exert exquisite, subangstrom control of the distance between INP in their membrane.

Entities:  

Year:  2019        PMID: 30977366     DOI: 10.1021/jacs.9b01854

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  13 in total

1.  Ice-binding proteins and the applicability and limitations of the kinetic pinning model.

Authors:  Michael Chasnitsky; Ido Braslavsky
Journal:  Philos Trans A Math Phys Eng Sci       Date:  2019-06-03       Impact factor: 4.226

2.  Pollen derived macromolecules serve as a new class of ice-nucleating cryoprotectants.

Authors:  Kathryn A Murray; Nina L H Kinney; Christopher A Griffiths; Muhammad Hasan; Matthew I Gibson; Thomas F Whale
Journal:  Sci Rep       Date:  2022-07-19       Impact factor: 4.996

3.  Minimalistic ice recrystallisation inhibitors based on phenylalanine.

Authors:  Matthew T Warren; Iain Galpin; Muhammad Hasan; Steven A Hindmarsh; John D Padrnos; Charlotte Edwards-Gayle; Robert T Mathers; Dave J Adams; Gabriele C Sosso; Matthew I Gibson
Journal:  Chem Commun (Camb)       Date:  2022-07-07       Impact factor: 6.065

4.  The role of structural order in heterogeneous ice nucleation.

Authors:  Gabriele C Sosso; Prerna Sudera; Anna T Backes; Thomas F Whale; Janine Fröhlich-Nowoisky; Mischa Bonn; Angelos Michaelides; Ellen H G Backus
Journal:  Chem Sci       Date:  2022-04-08       Impact factor: 9.969

5.  Ethylene glycol nanofluids dispersed with monolayer graphene oxide nanosheet for high-performance subzero cold thermal energy storage.

Authors:  Jingyi Zhang; Benwei Fu; Chengyi Song; Wen Shang; Peng Tao; Tao Deng
Journal:  RSC Adv       Date:  2021-09-14       Impact factor: 4.036

6.  Developments and Ongoing Challenges for Analysis of Surface-Bound Proteins.

Authors:  Tobias Weidner; David G Castner
Journal:  Annu Rev Anal Chem (Palo Alto Calif)       Date:  2021-07-27       Impact factor: 12.400

7.  Ice Nucleation Properties of Ice-binding Proteins from Snow Fleas.

Authors:  Akalabya Bissoyi; Naama Reicher; Michael Chasnitsky; Sivan Arad; Thomas Koop; Yinon Rudich; Ido Braslavsky
Journal:  Biomolecules       Date:  2019-09-25

Review 8.  Mimicking the Ice Recrystallization Activity of Biological Antifreezes. When is a New Polymer "Active"?

Authors:  Caroline I Biggs; Christopher Stubbs; Ben Graham; Alice E R Fayter; Muhammad Hasan; Matthew I Gibson
Journal:  Macromol Biosci       Date:  2019-05-14       Impact factor: 4.979

9.  Toward Understanding Bacterial Ice Nucleation.

Authors:  Max Lukas; Ralph Schwidetzky; Rosemary J Eufemio; Mischa Bonn; Konrad Meister
Journal:  J Phys Chem B       Date:  2022-01-27       Impact factor: 2.991

10.  Membranes Are Decisive for Maximum Freezing Efficiency of Bacterial Ice Nucleators.

Authors:  R Schwidetzky; P Sudera; A T Backes; U Pöschl; M Bonn; J Fröhlich-Nowoisky; K Meister
Journal:  J Phys Chem Lett       Date:  2021-11-01       Impact factor: 6.475

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