Literature DB >> 33974999

Correction of the pathogenic mutation in TGM1 gene by adenine base editing in mutant embryos.

Lu Dang1, Xueliang Zhou2, Xiufang Zhong3, Wenxia Yu4, Shisheng Huang4, Hanyan Liu2, Yuanyuan Chen3, Wuwen Zhang3, Lihua Yuan3, Lei Li2, Xingxu Huang4, Guanglei Li5, Jianqiao Liu6, Guoqing Tong7.   

Abstract

A couple diagnosed as carriers for lamellar ichthyosis, an autosomal recessive rare disease, encountered two pregnancy losses. Their blood samples showed the same heterozygous c.607C>T mutation in the TGM1 gene. However, we found that about 98.4% of the sperm had mutations, suggesting possible de novo germline mutation. To explore the probability of correcting this mutation, we used two different adenine base editors (ABEs) combined with related truncated single guide RNA (sgRNA) to repair the pathogenic mutation in mutant zygotes. Our results showed that the editing efficiency was 73.8% for ABEmax-NG combined with 20-bp-length sgRNA and 78.7% for Sc-ABEmax combined with 19-bp-length sgRNA. The whole-genome sequencing (WGS) and deep sequencing analysis demonstrated precise DNA editing. This study reveals the possibility of correcting the genetic mutation in embryos with the ABE system.
Copyright © 2021 The American Society of Gene and Cell Therapy. Published by Elsevier Inc. All rights reserved.

Entities:  

Keywords:  TGM1 gene; adenine base editing; correction; mutant embryos; pathogenic mutation

Mesh:

Substances:

Year:  2021        PMID: 33974999      PMCID: PMC8753292          DOI: 10.1016/j.ymthe.2021.05.007

Source DB:  PubMed          Journal:  Mol Ther        ISSN: 1525-0016            Impact factor:   11.454


  43 in total

Review 1.  Transglutaminase-1 gene mutations in autosomal recessive congenital ichthyosis: summary of mutations (including 23 novel) and modeling of TGase-1.

Authors:  Matthew L Herman; Sharifeh Farasat; Peter J Steinbach; Ming-Hui Wei; Ousmane Toure; Philip Fleckman; Patrick Blake; Sherri J Bale; Jorge R Toro
Journal:  Hum Mutat       Date:  2009-04       Impact factor: 4.878

2.  A three-dimensional model of the human transglutaminase 1: insights into the understanding of lamellar ichthyosis.

Authors:  Karen M Boeshans; Timothy C Mueser; Bijan Ahvazi
Journal:  J Mol Model       Date:  2006-09-23       Impact factor: 1.810

3.  BE-PLUS: a new base editing tool with broadened editing window and enhanced fidelity.

Authors:  Wen Jiang; Songjie Feng; Shisheng Huang; Wenxia Yu; Guanglei Li; Guang Yang; Yajing Liu; Yu Zhang; Lei Zhang; Yu Hou; Jia Chen; Jieping Chen; Xingxu Huang
Journal:  Cell Res       Date:  2018-06-06       Impact factor: 25.617

4.  Preclinical Evaluation of a Modified Herpes Simplex Virus Type 1 Vector Encoding Human TGM1 for the Treatment of Autosomal Recessive Congenital Ichthyosis.

Authors:  John C Freedman; Trevor J Parry; Peipei Zhang; Avijit Majumdar; Suma Krishnan; Lauren K Regula; Mark O'Malley; Sarah Coghlan; S D Yogesha; Sureshkumar Ramasamy; Pooja Agarwal
Journal:  J Invest Dermatol       Date:  2020-09-22       Impact factor: 8.551

5.  Transcriptome-wide off-target RNA editing induced by CRISPR-guided DNA base editors.

Authors:  Sara P Garcia; Sowmya Iyer; Caleb A Lareau; Julian Grünewald; Ronghao Zhou; Martin J Aryee; J Keith Joung
Journal:  Nature       Date:  2019-04-17       Impact factor: 49.962

6.  Off-target RNA mutation induced by DNA base editing and its elimination by mutagenesis.

Authors:  Changyang Zhou; Yidi Sun; Rui Yan; Yajing Liu; Erwei Zuo; Chan Gu; Linxiao Han; Yu Wei; Xinde Hu; Rong Zeng; Yixue Li; Haibo Zhou; Fan Guo; Hui Yang
Journal:  Nature       Date:  2019-06-10       Impact factor: 49.962

7.  Directed evolution of adenine base editors with increased activity and therapeutic application.

Authors:  Nicole M Gaudelli; Dieter K Lam; Holly A Rees; Noris M Solá-Esteves; Luis A Barrera; David A Born; Aaron Edwards; Jason M Gehrke; Seung-Joo Lee; Alexander J Liquori; Ryan Murray; Michael S Packer; Conrad Rinaldi; Ian M Slaymaker; Jonathan Yen; Lauren E Young; Giuseppe Ciaramella
Journal:  Nat Biotechnol       Date:  2020-04-13       Impact factor: 54.908

8.  Programmable base editing of A•T to G•C in genomic DNA without DNA cleavage.

Authors:  Nicole M Gaudelli; Alexis C Komor; Holly A Rees; Michael S Packer; Ahmed H Badran; David I Bryson; David R Liu
Journal:  Nature       Date:  2017-10-25       Impact factor: 49.962

9.  Generation of a Hutchinson-Gilford progeria syndrome monkey model by base editing.

Authors:  Fang Wang; Weiqi Zhang; Qiaoyan Yang; Yu Kang; Yanling Fan; Jingkuan Wei; Zunpeng Liu; Shaoxing Dai; Hao Li; Zifan Li; Lizhu Xu; Chu Chu; Jing Qu; Chenyang Si; Weizhi Ji; Guang-Hui Liu; Chengzu Long; Yuyu Niu
Journal:  Protein Cell       Date:  2020-07-29       Impact factor: 14.870

10.  Search-and-replace genome editing without double-strand breaks or donor DNA.

Authors:  Andrew V Anzalone; Peyton B Randolph; Jessie R Davis; Alexander A Sousa; Luke W Koblan; Jonathan M Levy; Peter J Chen; Christopher Wilson; Gregory A Newby; Aditya Raguram; David R Liu
Journal:  Nature       Date:  2019-10-21       Impact factor: 69.504

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  2 in total

Review 1.  New developments in the molecular treatment of ichthyosis: review of the literature.

Authors:  M D W Joosten; J M K Clabbers; N Jonca; J Mazereeuw-Hautier; A H Gostyński
Journal:  Orphanet J Rare Dis       Date:  2022-07-15       Impact factor: 4.303

Review 2.  Improvements of nuclease and nickase gene modification techniques for the treatment of genetic diseases.

Authors:  Yaoyao Lu; Cedric Happi Mbakam; Bo Song; Eli Bendavid; Jacques-P Tremblay
Journal:  Front Genome Ed       Date:  2022-07-26
  2 in total

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