Literature DB >> 3396544

Interaction of a protein from rat liver nuclei with cruciform DNA.

M E Bianchi1.   

Abstract

We constructed a synthetic cruciform DNA which closely resembles Holliday junctions, a DNA structure formed during recombination or following the transition from interstrand to intrastrand base pairing in palindromic DNA sequences. We identified and partially purified a protein from rat liver that specifically binds to this cruciform DNA molecule and does not bind to single-stranded or double-stranded DNAs of the same sequence. This protein also binds to the cruciform structure formed by a 70 bp palindromic sequence cloned in plasmid pUC18. No detectable nucleolytic activity is associated with the rat liver cruciform-binding protein, in contrast to all cruciform-recognizing proteins known so far.

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Year:  1988        PMID： 3396544      PMCID： PMC454401          DOI： 10.1002/j.1460-2075.1988.tb02883.x

Source DB:  PubMed          Journal:  EMBO J        ISSN： 0261-4189            Impact factor:   11.598


  22 in total

1.  Occurrence of crossed strand-exchange forms in yeast DNA during meiosis.

Authors:  L Bell; B Byers
Journal:  Proc Natl Acad Sci U S A       Date:  1979-07       Impact factor: 11.205

2.  Cruciform structures in palindromic DNA are favored by DNA supercoiling.

Authors:  K Mizuuchi; M Mizuuchi; M Gellert
Journal:  J Mol Biol       Date:  1982-04-05       Impact factor: 5.469

3.  T4 endonuclease VII cleaves holliday structures.

Authors:  K Mizuuchi; B Kemper; J Hays; R A Weisberg
Journal:  Cell       Date:  1982-06       Impact factor: 41.582

4.  Cruciform-resolvase interactions in supercoiled DNA.

Authors:  D M Lilley; B Kemper
Journal:  Cell       Date:  1984-02       Impact factor: 41.582

5.  Cruciform formation in a negatively supercoiled DNA may be kinetically forbidden under physiological conditions.

Authors:  A J Courey; J C Wang
Journal:  Cell       Date:  1983-07       Impact factor: 41.582

6.  DNA replication-mediated recombination of molecules of adenovirus 2 DNA.

Authors:  D J Wolgemuth; M T Hsu
Journal:  Proc Natl Acad Sci U S A       Date:  1981-08       Impact factor: 11.205

7.  Nucleotide sequence of the region encompassing the JC virus origin of DNA replication.

Authors:  R J Frisque
Journal:  J Virol       Date:  1983-04       Impact factor: 5.103

8.  Accurate transcription initiation by RNA polymerase II in a soluble extract from isolated mammalian nuclei.

Authors:  J D Dignam; R M Lebovitz; R G Roeder
Journal:  Nucleic Acids Res       Date:  1983-03-11       Impact factor: 16.971

9.  Purification and properties of a nuclease from Saccharomyces cerevisiae that cleaves DNA at cruciform junctions.

Authors:  S C West; C A Parsons; S M Picksley
Journal:  J Biol Chem       Date:  1987-09-15       Impact factor: 5.157

10.  Chromosomal replication origin from the marine bacterium Vibrio harveyi functions in Escherichia coli: oriC consensus sequence.

Authors:  J W Zyskind; J M Cleary; W S Brusilow; N E Harding; D W Smith
Journal:  Proc Natl Acad Sci U S A       Date:  1983-03       Impact factor: 11.205
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  38 in total

1.  Interaction of nuclear proteins with intrinsically curved DNA in a matrix attachment region of a tobacco gene.

Authors:  Y Fukuda
Journal:  Plant Mol Biol       Date:  2000-09       Impact factor: 4.076

2.  DNA binding by single HMG box model proteins.

Authors:  H Xin; S Taudte; N R Kallenbach; M P Limbach; R S Zitomer
Journal:  Nucleic Acids Res       Date:  2000-10-15       Impact factor: 16.971

Review 3.  New EMBO members' review: the double life of HMGB1 chromatin protein: architectural factor and extracellular signal.

Authors:  S Müller; P Scaffidi; B Degryse; T Bonaldi; L Ronfani; A Agresti; M Beltrame; M E Bianchi
Journal:  EMBO J       Date:  2001-08-15       Impact factor: 11.598

4.  The interferon-inducible nucleolar p204 protein binds the ribosomal RNA-specific UBF1 transcription factor and inhibits ribosomal RNA transcription.

Authors:  C J Liu; H Wang; P Lengyel
Journal:  EMBO J       Date:  1999-05-17       Impact factor: 11.598

5.  Structure-specific binding of the proto-oncogene protein DEK to DNA.

Authors:  Tanja Waldmann; Martina Baack; Nicole Richter; Claudia Gruss
Journal:  Nucleic Acids Res       Date:  2003-12-01       Impact factor: 16.971

6.  Condensin but not cohesin SMC heterodimer induces DNA reannealing through protein-protein assembly.

Authors:  Akiko Sakai; Kohji Hizume; Takashi Sutani; Kunio Takeyasu; Mitsuhiro Yanagida
Journal:  EMBO J       Date:  2003-06-02       Impact factor: 11.598

Review 7.  Post-translational modifications of high mobility group box 1 and cancer.

Authors:  Seidu A Richard; Yuanyuan Jiang; Lu Hong Xiang; Shanshan Zhou; Jia Wang; Zhaoliang Su; Huaxi Xu
Journal:  Am J Transl Res       Date:  2017-12-15       Impact factor: 4.060

8.  Evidence for torsional stress in transcriptionally activated chromatin.

Authors:  M W Leonard; R K Patient
Journal:  Mol Cell Biol       Date:  1991-12       Impact factor: 4.272

9.  Supercoil-induced unusual DNA structures as transcriptional block.

Authors:  R Bagga; N Ramesh; S K Brahmachari
Journal:  Nucleic Acids Res       Date:  1990-06-11       Impact factor: 16.971

10.  Competition between HMG-I(Y), HMG-1 and histone H1 on four-way junction DNA.

Authors:  D A Hill; R Reeves
Journal:  Nucleic Acids Res       Date:  1997-09-01       Impact factor: 16.971
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