| Literature DB >> 33960601 |
Yury V Vishnevskiy1, Norbert W Mitzel1.
Abstract
We reply to the comment by J.-M. Mewes, A. Hansen and S. Grimme (MHG), who challenged the accuracy of our re value for the N⋅⋅⋅Te distance in (C6 F5 )Te(CH2 )3 NMe2 determined by gas electron diffraction (GED). We conclusively demonstrate that MHG's quoted reference calculations are less accurate than they claim for solid state and gas phase. We show by higher level calculations, that we did not miss substantial contributions from open-chain conformers. Refinements on simulated scattering data show that such contributions would have had only an almost negligible effect on re (N⋅⋅⋅Te). MHG suggested the use of a H0-tuned GFN method for calculating vibrational corrections ra -re , but this did not change these values substantially. Alternative amplitude calculations using higher level analytic harmonic and numeric cubic force fields (PBE0-D3BJ/def2-TZVP) yield a GED value for re (N⋅⋅⋅Te)=2.852(25) Å that is well within the experimental error of our original value 2.918(31) Å but far from the 2.67(8) Å predicted by MHG. A now improved error estimation accounts for inaccuracies in the calculated auxiliary values. The gas/solid difference of the weak N⋅⋅⋅Te interaction is in a realistic range compared to other systems involving weak chemical interactions.Entities:
Keywords: electron diffraction; quantum chemical calculations; solid-gas differences; temperature effects; weakly bonded systems
Year: 2021 PMID: 33960601 PMCID: PMC8251573 DOI: 10.1002/anie.202104899
Source DB: PubMed Journal: Angew Chem Int Ed Engl ISSN: 1433-7851 Impact factor: 15.336
Figure 1Gas‐phase structure of 1 as determined by gas electron diffraction.
Experimental, corrected experimental and calculated geometrical parameters of 1 in the solid state.
|
Solid 1 |
|
|
|
|---|---|---|---|
|
XRD measured, |
2.639(1) |
2.189(1) |
2.159(1) |
|
|
0.024 |
0.004 |
0.009 |
|
XRD corrected, |
2.615 |
2.185 |
2.150 |
|
r2SCAN‐3c (MHG), |
2.636 |
2.216 |
2.184 |
|
PBE‐D4 (MHG), |
2.624 |
2.223 |
2.187 |
|
M06‐L (MHG), |
2.730 |
2.220 |
2.178 |
Optimized structures of conformers of 1 and their zero‐point‐corrected energies (kcal mol−1) and abundancies x at 445 K according to the Boltzmann distribution.
|
Conf. |
N⋅⋅⋅Te |
CCTeC |
CTeCC |
TeCCC |
CCCN |
CCNC‐1 |
CCNC‐2 |
|
|
|
|---|---|---|---|---|---|---|---|---|---|---|
|
|
2.744 |
−51.6 |
−155.3 |
−56.3 |
63.0 |
80.2 |
−153.4 |
0.0 |
0.0 |
60.0 |
|
|
2.738 |
−60.8 |
157.5 |
54.1 |
−63.1 |
154.2 |
−79.4 |
0.336 |
0.369 |
39.5 |
|
|
5.486 |
−46.2 |
−163.3 |
−178.3 |
175.1 |
68.7 |
−166.6 |
6.850 |
6.679 |
<0.1 |
|
|
5.485 |
−50.5 |
−172.9 |
−179.7 |
−174.4 |
−68.5 |
166.8 |
6.969 |
6.812 |
<0.1 |
|
|
5.547 |
−48.0 |
−168.3 |
−178.6 |
−179.6 |
65.7 |
−65.6 |
7.580 |
7.795 |
<0.1 |
|
|
4.958 |
v53.9 |
178.2 |
−179.3 |
55.0 |
−169.2 |
65.4 |
6.210 |
6.064 |
<0.1 |
|
|
4.955 |
−47.2 |
−162.0 |
178.4 |
−56.6 |
−66.7 |
168.0 |
6.059 |
5.915 |
<0.1 |
|
|
4.761 |
−54.9 |
136.3 |
−72.7 |
170.8 |
67.4 |
−167.8 |
7.178 |
7.213 |
<0.1 |
|
|
4.720 |
−58.1 |
154.8 |
59.2 |
172.9 |
−169.1 |
66.0 |
6.540 |
6.588 |
<0.1 |
|
|
3.486 |
−45.8 |
−47.3 |
−54.0 |
90.3 |
76.8 |
−157.2 |
5.264 |
4.827 |
0.2 |
[a] Has one imaginary frequency in the DFT calculation.
Compilation of the results of experimental structure determinations of weakly bound adduct systems for which values exist in both, the crystalline and the gas phase (the column r provides information on the structure type of the gas phase value,[a] Δr is the difference r(gas)−r(solid), BDE is the experimental bond dissociation enthalpy in kcal mol−1, where available).
|
Compound |
|
|
|
Δ |
BDE |
|---|---|---|---|---|---|
|
|
|
|
|
|
|
|
H3B⋅⋅⋅NH3 |
1.56(5) |
1.6453(1) |
|
0.085(50) |
|
|
|
|
|
|
|
|
|
H3B⋅⋅⋅NMe3 |
1.617(4) |
1.656(3) 1.638(10) |
|
0.039(5) 0.021(11) |
40(9) |
|
|
|
|
|
|
|
|
H3B⋅⋅⋅C4H9NO[b] |
1.605(9) |
1.644(6) |
|
0.039(11) |
|
|
|
|
|
|
|
|
|
F3B⋅⋅⋅NMe3 |
1.58 |
1.636(4) 1.674(4) |
|
0.056(11) 0.094(11) |
32.9 |
|
|
|
|
|
|
|
|
F3B⋅⋅⋅NH3 |
1.580(1)[ |
1.673(2) |
|
0.093(2) |
19.2 |
|
F3B⋅⋅⋅NCH |
1.638(2) |
2.473(29) |
|
0.835(29) |
|
|
F3B⋅⋅⋅NCCH3 |
1.630(4) |
2.011(7) |
|
0.381(8) |
5.7 |
|
(F3C)3B⋅⋅⋅CO |
1.69(2)[c] |
1.617(12) |
|
−0.53(23)[c] |
|
|
|
|
|
|
|
|
|
Me3B⋅⋅⋅NMe3 |
1.564 |
1.69(4) 1.698(10) |
|
0.126(40) 0.134(10) |
|
|
|
|
|
|
|
|
|
Me3Al⋅⋅⋅OMe2 |
1.940(2) |
2.014(24) |
|
0.074(24) |
21.9(2) |
|
Me3Al⋅⋅⋅SMe2 |
2.461[d] |
2.55(2) |
|
0.089(20) |
18.1(5) |
|
H3Ga⋅⋅⋅PMe3 |
2.3857(6) |
2.443(6) |
|
0.057(6) |
|
|
|
|
|
|
|
|
|
H3Ga⋅⋅⋅NMe3 |
1.97(9) |
2.111(2) 2.139(4) |
|
0.141(90) 0.169(90) |
|
|
|
|
|
|
|
|
|
O3S⋅⋅⋅NH3 |
1.7714(3) |
1.957(23) |
|
0.186(23) |
19.1 |
|
O2S⋅⋅⋅NHMe2 |
2.003(12) |
2.335(30) |
|
0.332(32) |
10.3 |
|
|
|
|
|
|
|
|
O2S⋅⋅⋅NMe3 |
2.046(4) |
2.260(30) 2.285(30) |
|
0.214(30) 0.239(30) |
13.4 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
FSi(OCH2CH2)3N |
2.042(1) |
2.324(14) |
|
0.282(14) |
|
|
F3SiONMe2 |
1.963(1) |
2.273(17) |
|
0.310(17) |
|
|
ClH2SiONMe2 |
2.028(1) |
2.160(7) |
|
0.132(7) |
|
|
(F3C)F2SiONMe2 |
1.904(2) |
2.112(17) |
|
0.208(17) |
|
|
H3Si(CH2)3NMe2 |
2.719(2) |
2.91(4) |
|
0.191(40) |
|
|
|
2.639(1) |
2.918(31) |
|
0.279(31) |
|
|
|
2.636[e] |
2.67(8)[e] |
|
0.034(80) |
≈8[e] |
[a] Uncertainties are given as in the original publications without modification. If missing, they were assumed to be in the last stated digit. [b] C4H9NO=morpholine. [c] Value of very limited quality. [d] Average value. [e] Theoretical estimate by MHG.