Literature DB >> 33945405

The translation initiation factor EIF4E5 from Leishmania: crystal structure and interacting partners.

Gustavo Barbosa de Lima1, Thaíse Yasmine Vasconcelos de Lima Cavalcanti1,2, Adriana Neuman Albuquerque Lins Moura de Brito1,2, Ludmilla Arruda de Assis1, Rafaela Paiva Andrade-Vieira1, Eden Ribeiro Freire1,3, Tatiana Reichert da Silva Assunção3, Christian Robson de Souza Reis1, Nilson Ivo Tonin Zanchin3, Beatriz Gomes Guimarães3, Osvaldo Pompílio de-Melo-Neto1.   

Abstract

The mRNA cap-binding protein, eIF4E, mediates the recognition of the mRNA 5' end and, as part of the heterotrimeric eIF4F complex, facilitates the recruitment of the ribosomal subunits to initiate eukaryotic translation. Various regulatory events involving eIF4E and a second eIF4F subunit, eIF4G, are required for proper control of translation initiation. In pathogenic trypanosomatids, six eIF4Es and five eIF4Gs have been described, several forming different eIF4F-like complexes with yet unresolved roles. EIF4E5 is one of the least known of the trypanosomatid eIF4Es and has not been characterized in Leishmania species. Here, we used immunoprecipitation assays, combined with mass-spectrometry, to identify major EIF4E5 interacting proteins in L. infantum. A constitutively expressed, HA-tagged, EIF4E5 co-precipitated mainly with EIF4G1 and binding partners previously described in Trypanosoma brucei, EIF4G1-IP, RBP43 and the 14-3-3 proteins. In contrast, no clear co-precipitation with EIF4G2, also previously reported, was observed. EIF4E5 also co-precipitated with protein kinases, possibly associated with cell-cycle regulation, selected RNA binding proteins and histones. Phosphorylated residues were identified and mapped to the Leishmania-specific C-terminal end. Mutagenesis of the tryptophan residue (W53) postulated to mediate interactions with protein partners or of a neighbouring tryptophan conserved in Leishmania (W45) did not substantially impair the identified interactions. Finally, the crystal structure of Leishmania EIF4E5 evidences remarkable differences in the eIF4G interfacing region, when compared with human eIF4E-1 and with its Trypanosoma orthologue. Mapping of its C-terminal end near the cap-binding site also imply relevant differences in cap-binding function and/or regulation.

Entities:  

Keywords:  EIF4E5; Leishmania; Translation initiation; crystal structure; protein interaction

Mesh:

Substances:

Year:  2021        PMID: 33945405      PMCID: PMC8632131          DOI: 10.1080/15476286.2021.1918919

Source DB:  PubMed          Journal:  RNA Biol        ISSN: 1547-6286            Impact factor:   4.652


  76 in total

1.  Gene expression regulatory networks in Trypanosoma brucei: insights into the role of the mRNA-binding proteome.

Authors:  Smiths Lueong; Clementine Merce; Bernd Fischer; Jörg D Hoheisel; Esteban D Erben
Journal:  Mol Microbiol       Date:  2016-03-10       Impact factor: 3.501

2.  The 14-3-3 proteins of Trypanosoma brucei function in motility, cytokinesis, and cell cycle.

Authors:  Masahiro Inoue; Yasuo Nakamura; Kouichi Yasuda; Natsumi Yasaka; Tatsuru Hara; Achim Schnaufer; Kenneth Stuart; Toshihide Fukuma
Journal:  J Biol Chem       Date:  2005-01-14       Impact factor: 5.157

3.  Molecular replacement with MOLREP.

Authors:  Alexei Vagin; Alexei Teplyakov
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-12-21

4.  Trypanosoma brucei translation initiation factor homolog EIF4E6 forms a tripartite cytosolic complex with EIF4G5 and a capping enzyme homolog.

Authors:  Eden R Freire; Amaranta M Malvezzi; Ajay A Vashisht; Joanna Zuberek; Edwin A Saada; Gerasimos Langousis; Janaína D F Nascimento; Danielle Moura; Edward Darzynkiewicz; Kent Hill; Osvaldo P de Melo Neto; James A Wohlschlegel; Nancy R Sturm; David A Campbell
Journal:  Eukaryot Cell       Date:  2014-05-16

5.  Binding specificities and potential roles of isoforms of eukaryotic initiation factor 4E in Leishmania.

Authors:  Yael Yoffe; Joanna Zuberek; Asaf Lerer; Magdalena Lewdorowicz; Janusz Stepinski; Michael Altmann; Edward Darzynkiewicz; Michal Shapira
Journal:  Eukaryot Cell       Date:  2006-10-13

6.  Translation initiation in Leishmania major: characterisation of multiple eIF4F subunit homologues.

Authors:  Rafael Dhalia; Christian R S Reis; Eden R Freire; Pollyanna O Rocha; Rodolfo Katz; João R C Muniz; Nancy Standart; Osvaldo P de Melo Neto
Journal:  Mol Biochem Parasitol       Date:  2005-03       Impact factor: 1.759

7.  Structural insights into parasite eIF4E binding specificity for m7G and m2,2,7G mRNA caps.

Authors:  Weizhi Liu; Rui Zhao; Craig McFarland; Jeffrey Kieft; Anna Niedzwiecka; Marzena Jankowska-Anyszka; Janusz Stepinski; Edward Darzynkiewicz; David N M Jones; Richard E Davis
Journal:  J Biol Chem       Date:  2009-08-26       Impact factor: 5.157

Review 8.  The scanning mechanism of eukaryotic translation initiation.

Authors:  Alan G Hinnebusch
Journal:  Annu Rev Biochem       Date:  2014-01-29       Impact factor: 23.643

Review 9.  A recap of RNA recapping.

Authors:  Jackson B Trotman; Daniel R Schoenberg
Journal:  Wiley Interdiscip Rev RNA       Date:  2018-09-05       Impact factor: 9.957

10.  The translation initiation complex eIF3 in trypanosomatids and other pathogenic excavates--identification of conserved and divergent features based on orthologue analysis.

Authors:  Antonio M Rezende; Ludmila A Assis; Eduardo C Nunes; Tamara D da Costa Lima; Fabricio K Marchini; Eden R Freire; Christian R S Reis; Osvaldo P de Melo Neto
Journal:  BMC Genomics       Date:  2014-12-23       Impact factor: 3.969

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