| Literature DB >> 33936017 |
Yao Feng1,2, Jian-Kui Jack Liu3, Chuan-Gen Lin4, Ya-Ya Chen2,5, Mei-Mei Xiang6, Zuo-Yi Liu2.
Abstract
Arthrinium has a widespread distribution occurring in various substrates (e.g., air, soil debris, plants, lichens, marine algae and even human tissues). It is characterized by the basauxic conidiogenesis in the asexual morph, with apiospores in the sexual morph. In this study, seventeen isolates of Arthrinium were collected in China. Based on their morphology and phylogenetic characterization, four new species (A. biseriale, A. cyclobalanopsidis, A. gelatinosum, and A. septatum) are described and seven known species (A. arundinis, A. garethjonesii, A. guizhouense, A. hydei, A. neosubglobosa, A. phyllostachium and A. psedoparenchymaticum) are identified, of which the sexual morph of three species (A. guizhouense, A. phyllostachium and A. psedoparenchymaticum) and asexual morph of A. garethjonesii are reported for the first time. The detailed descriptions, illustrations and comparisons with related taxa of these new collections are provided. Phylogenetic analyses of combined ITS, LSU, TUB2, and TEF sequence data support their placements in the genus Arthrinium and justify the new species establishments and identifications of known species.Entities:
Keywords: 4 new taxa; asexual-sexual morphs; multi-genes; phylogeny; taxonomy
Year: 2021 PMID: 33936017 PMCID: PMC8086194 DOI: 10.3389/fmicb.2021.661281
Source DB: PubMed Journal: Front Microbiol ISSN: 1664-302X Impact factor: 5.640
GenBank accession numbers of species included in the phylogenetic study.
| Species | Strain no. | GenBank Accession Numbers | |||
| LSU | ITS | TEF | TUB2 | ||
| KUMCC 20–0209 | MT946338 | MT946342 | MT947359 | MT947365 | |
| KUMCC 20–0210 | MT946339 | MT946343 | MT947360 | MT947366 | |
| MLFU 18–1628 | MK835806 | MK828608 | N/A | N/A | |
| CBS 106.12 | KF144927 | KF144883 | KF145015 | KF144973 | |
| CBS 114316 | KF144928 | KF144884 | KF145016 | KF144974 | |
| CBS 244.83 | KF144935 | AB220251 | KF145023 | KF144981 | |
| CBS 145129 | MK014836 | MK014869 | MK017946 | MK017975 | |
| LC7107 | N/A | KY494719 | KY705117 | KY705187 | |
| LC7106 | KY494794 | KY494718 | KY806204 | KY705186 | |
| MFLUCC 20–0144 | MW173087 | MW173030 | MW183262 | N/A | |
| LC8181 | KY494837 | KY494761 | KY705157 | KY705229 | |
| LC5007 | KY494780 | KY494704 | KY705103 | KY705173 | |
| CBS 145127 | MK014838 | MK014871 | MK017948 | MK017977 | |
| CFCC53036 | N/A | MK819291 | MK818545 | MK818547 | |
| CFCC53037 | N/A | MK819292 | MK818546 | MK818548 | |
| MFLUCC 17-1505 | MT214436 | MT214342 | N/A | N/A | |
| CBS 145130 | MK014837 | MK014870 | MK017947 | MK017976 | |
| LC8175 | KY494831 | KY494755 | KY705151 | kY705223 | |
| LC4950 | KY494773 | KY494697 | KY705096 | KY705167 | |
| CBS 145136 | MK014845 | MK014878 | MK017954 | MK017983 | |
| IMI 285638b | AB220335 | AB220241 | N/A | AB220288 | |
| CFCC 52301 | N/A | MH197124 | MH236793 | MH236789 | |
| CFCC 52302 | N/A | MH197125 | MH236794 | MH236790 | |
| KUMCC16–0202 | KY356091 | KY356086 | N/A | N/A | |
| LC5318 | KY494784 | KY494708 | KY705107 | KY705177 | |
| LC5322 | KY494785 | KY494709 | KY705108 | KY705178 | |
| CBS 135835 | KR149063 | KR011352 | KR011351 | KR011350 | |
| IMI 326877 | AB220336 | AB220242 | N/A | AB220289 | |
| CBS 114990 | KF144936 | KF144890 | KF145024 | KF144982 | |
| KUMCC 16–0204 | KY356092 | KY356087 | N/A | N/A | |
| KUMCC 16–0201 | KY356093 | KY356088 | N/A | N/A | |
| MFLUCC15–0003 | N/A | KR069110 | N/A | N/A | |
| CBS 145134 | MK014843 | MK014876 | N/A | N/A | |
| ICMP 6889 | MK014841 | MK014874 | MK017951 | MK017980 | |
| CBS 145137 | MK014846 | MK014879 | MK017955 | MK017984 | |
| CBS 145138 | MK014847 | MK014880 | MK017956 | MK017985 | |
| IFO 30500 | AB220356 | AB220262 | N/A | AB220309 | |
| IFO 31098 | AB220358 | AB220264 | N/A | AB220311 | |
| MMI 00052 | N/A | JQ246355 | N/A | N/A | |
| AMH–9557 | N/A | JQ246355 | N/A | N/A | |
| LC4577 | KY494769 | KY494693 | KY705092 | KY705163 | |
| LC4578 | KY494770 | KY494694 | KY705093 | KY705164 | |
| CBS 113332 | KF144937 | KF144891 | KF145025 | KF144983 | |
| CBS 113333 | KF144938 | KF144892 | KF145026 | KF144984 | |
| LC11683 | N/A | MF939595 | MF939616 | MF939622 | |
| MFLUCC 11–0481 | KU863129 | KU940141 | N/A | N/A | |
| MFLUCC 11–0479 | KU863130 | KU940142 | N/A | N/A | |
| CBS 102053 | KF144942 | KF144896 | KF145030 | KF144988 | |
| CBS 251.29 | KF144943 | KF144897 | KF145031 | KF144989 | |
| CBS 497.90 | KF144947 | AB220252 | KF145035 | KF144993 | |
| IMI 326875 | AB220337 | AB220243 | N/A | AB220290 | |
| CBS 145131 | MK014839 | MK014872 | MK017949 | MK017978 | |
| DAOM 214595 | N/A | KY494685 | N/A | N/A | |
| KUMCC 18–0192 | MK070898 | MK070897 | N/A | N/A | |
| KUMCC 16–0203 | KY356095 | KY356090 | N/A | N/A | |
| JHB006 | KY356094 | KY356089 | N/A | N/A | |
| LC8177 | KY494833 | KY494757 | KY705153 | KY705225 | |
| LC4940 | KY494772 | KY494696 | KY705095 | KY705166 | |
| CBS 115042 | KF144950 | KF144903 | KF145037 | KF144995 | |
| MFLUCC 13–0644 | KX822124 | KX822128 | N/A | N/A | |
| CBS 114314 | KF144951 | KF144904 | KF145038 | KF144996 | |
| CBS 114315 | KF144952 | KF144905 | KF145039 | KF144997 | |
| CPC 18900 | KF144956 | KF144909 | KF145043 | KF145001 | |
| MFLUCC 18–1101 | MH368077 | MK351842 | MK340918 | MK291949 | |
| CBS 145149 | MK014860 | MK014893 | MK017969 | N/A | |
| LC7234 | KY494819 | KY494743 | KY705139 | KY705211 | |
| LC8173 | KY494829 | KY494753 | KY705149 | KY705221 | |
| KUMCC 20–0208 | N/A | MT946344 | MT947361 | MT947367 | |
| KUMCC 20–0211 | N/A | MT946345 | MT947362 | MT947368 | |
| CPC 21546 | KF144957 | KF144910 | KF145044 | N/A | |
| CBS 135459 | N/A | KF144910 | KF145044 | N/A | |
| CBS 102052 | KF144958 | KF144911 | KF145045 | KF145002 | |
| CBS 123185 | KF144959 | KF144912 | N/A | KF145003 | |
| CPC 20193 | KF144960 | KF144913 | KF145046 | KF145004 | |
| CBS 145150 | MK014861 | MK014894 | MK017970 | MK017998 | |
| CBS 549.86 | AB220347 | AB220253 | N/A | AB220300 | |
| CFCC 52303 | N/A | MH197120 | MH236795 | MH236791 | |
| CFCC 52304 | N/A | MH197121 | MH236796 | MH236792 | |
| CBS 145152 | MK014863 | MK014896 | MK017971 | MK017999 | |
| LC7115 | KY494797 | KY494721 | KY705118 | KY705189 | |
| NFCCI 2144 | N/A | JF326454 | N/A | N/A | |
| CBS 212.30 | KF144963 | KF144917 | KF145048 | KF145006 | |
| CBS 301.49 | KF144962 | KF144916 | KF145047 | KF145005 | |
| CBS 191.73 | KF144966 | KF144920 | KF145051 | KF145009 | |
| CBS 463.83 | KF144968 | KF144921 | KF145053 | KF145011 | |
| IMI 326869 | AB220344 | AB220250 | N/A | AB220297 | |
| KUMCC 19–0217 | MN528011 | MN528012 | MN527357 | N/A | |
| CBS 145154 | MK014865 | MK014898 | MK017973 | MK018001 | |
| MFLUCC 11–0397 | KR069113 | KR069112 | N/A | N/A | |
| LC7292 | KY494828 | KY494752 | KY705148 | KY705220 | |
| MFLUCC 15–0199 | KX986111 | KU940146 | N/A | N/A | |
| MFLUCC 15–0202 | KU863133 | KU940145 | N/A | N/A | |
| CFCC 53038 | N/A | MK301098 | MK303396 | MK303394 | |
| CFCC 53039 | N/A | MK301099 | MK303397 | MK303395 | |
| IMI 326344 | AB220339 | AB220245 | N/A | N/A | |
| IMI 99670 | KX986111 | KX986096 | N/A | KY019466 | |
| CBS478.86 | KF144970 | KF144925 | KF145055 | KF145013 | |
| CBS 595.66 | KF144971 | KF144926 | N/A | N/A | |
| DDQ 00281 | KU863136 | KU940148 | N/A | N/A | |
| MFLU 15–0002 | N/A | KU940147 | N/A | N/A | |
| CPC 19962 | NG 042759 | LT853092 | LT853189 | LT853239 | |
| CPC 19965 | KC005809 | LT853093 | LT853190 | LT853240 | |
FIGURE 1RAxML tree of representatives based on a combined dataset of ITS, LSU, TUB2 and TEF sequences. Bootstrap support values for ML, MP (≥75%) and Bayesian (≥0.95) are given at the nodes (ML/MP/BI). Branches with ML, MP and BI equal 100, 100 and 1 are in bold. The tree is rooted with Seiridium phylicae (CPC 19962 and CPC 19965). New strains are shown in red.
FIGURE 9(GZAAS 20–0115) (A,B) Appearance of stromata on bamboo host. (C) Vertical section of stroma. (D) Paraphyses. (E) Peridium. (F) Germinating ascospore. (G) Culture. (H–J) Asci. (K–O) Ascospore. (P) Ascospore in Indian ink and present clear gelatinous sheath. (Q) Colony on WA producing conidia masses. (R) Dentate conidia. (S–U) Conidiogenous cells giving rise to conidia. Scale bars: (C) = 50 μm. (D–F) = 20 μm. (H–J) = 30 μm. (K–P) = 15 μm. (R–U) = 15 μm.