Literature DB >> 33935588

S-Adenosyl-l-ethionine is a Catalytically Competent Analog of S-Adenosyl-l-methione (SAM) in the Radical SAM Enzyme HydG.

Stella Impano1, Hao Yang2, Eric M Shepard1, Ryan Swimley1, Adrien Pagnier1, William E Broderick1, Brian M Hoffman1, Joan B Broderick1.   

Abstract

Radical S-adenosyl-l-methionine (SAM) enzymes initiate biological radical reactions with the 5'-deoxyadenosyl radical (5'-dAdo•). A [4Fe-4S]+ cluster reductively cleaves SAM to form the Ω organometallic intermediate in which the 5'-deoxyadenosyl moiety is directly bound to the unique iron of the [4Fe-4S] cluster, with subsequent liberation of 5'-dAdo•. Here we present synthesis of the SAM analog S-adenosyl-l-ethionine (SAE) and show SAE is a mechanistically-equivalent SAM-alternative for HydG, both supporting enzymatic turnover of substrate tyrosine and forming the organometallic intermediate Ω. Photolysis of SAE bound to HydG forms an ethyl radical trapped in the active site. The ethyl radical withstands prolonged storage at 77 K and its EPR signal is only partially lost upon annealing at 100 K, making it significantly less reactive than the methyl radical formed by SAM photolysis. Upon annealing above 77K, the ethyl radical adds to the [4Fe-4S]2+ cluster, generating an ethyl-[4Fe-4S]3+ organometallic species termed ΩE.

Entities:  

Keywords:  EPR; S-adenosylethionine; ethyl radical; organometallic; radical SAM

Mesh:

Substances:

Year:  2020        PMID: 33935588      PMCID: PMC8081114          DOI: 10.1002/anie.202014337

Source DB:  PubMed          Journal:  Angew Chem Int Ed Engl        ISSN: 1433-7851            Impact factor:   15.336


  39 in total

1.  Improved procedure for the isolation of S-adenosylmethionine and S-adenosylethionine.

Authors:  F SCHLENK; J L DAINKO; S M STANFORD
Journal:  Arch Biochem Biophys       Date:  1959-07       Impact factor: 4.013

2.  Differential inhibition of bacterial tRNA methylases by S-adenosylethionine and other adenine derivatives.

Authors:  B G Moore
Journal:  Can J Biochem       Date:  1970-06

3.  Formation of S-adenosylethionine by ethionine-treated rats.

Authors:  R C Smith; W D Salmon
Journal:  Arch Biochem Biophys       Date:  1965-07       Impact factor: 4.013

4.  High-performance liquid chromatography separation of the (S,S)- and (R,S)-forms of S-adenosyl-L-methionine.

Authors:  Jianyu Zhang; Judith P Klinman
Journal:  Anal Biochem       Date:  2015-02-11       Impact factor: 3.365

5.  Radical SAM Enzyme HydE Generates Adenosylated Fe(I) Intermediates En Route to the [FeFe]-Hydrogenase Catalytic H-Cluster.

Authors:  Lizhi Tao; Scott A Pattenaude; Sumedh Joshi; Tadhg P Begley; Thomas B Rauchfuss; R David Britt
Journal:  J Am Chem Soc       Date:  2020-06-03       Impact factor: 15.419

6.  X-ray crystallographic and EPR spectroscopic analysis of HydG, a maturase in [FeFe]-hydrogenase H-cluster assembly.

Authors:  Pedro Dinis; Daniel L M Suess; Stephen J Fox; Jenny E Harmer; Rebecca C Driesener; Liliana De La Paz; James R Swartz; Jonathan W Essex; R David Britt; Peter L Roach
Journal:  Proc Natl Acad Sci U S A       Date:  2015-01-20       Impact factor: 11.205

7.  H-cluster assembly intermediates built on HydF by the radical SAM enzymes HydE and HydG.

Authors:  Amanda S Byer; Eric M Shepard; Michael W Ratzloff; Jeremiah N Betz; Paul W King; William E Broderick; Joan B Broderick
Journal:  J Biol Inorg Chem       Date:  2019-09-06       Impact factor: 3.358

Review 8.  H-cluster assembly during maturation of the [FeFe]-hydrogenase.

Authors:  Joan B Broderick; Amanda S Byer; Kaitlin S Duschene; Benjamin R Duffus; Jeremiah N Betz; Eric M Shepard; John W Peters
Journal:  J Biol Inorg Chem       Date:  2014-06-28       Impact factor: 3.358

9.  The Radical SAM Enzyme HydG Requires Cysteine and a Dangler Iron for Generating an Organometallic Precursor to the [FeFe]-Hydrogenase H-Cluster.

Authors:  Daniel L M Suess; Cindy C Pham; Ingmar Bürstel; James R Swartz; Stephen P Cramer; R David Britt
Journal:  J Am Chem Soc       Date:  2016-01-20       Impact factor: 15.419

Review 10.  Radical SAM enzymes: surprises along the path to understanding mechanism.

Authors:  William E Broderick; Joan B Broderick
Journal:  J Biol Inorg Chem       Date:  2019-09-07       Impact factor: 3.358

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  3 in total

1.  The B12-independent glycerol dehydratase activating enzyme from Clostridium butyricum cleaves SAM to produce 5'-deoxyadenosine and not 5'-deoxy-5'-(methylthio)adenosine.

Authors:  William G Walls; James D Moody; Elizabeth C McDaniel; Maria Villanueva; Eric M Shepard; William E Broderick; Joan B Broderick
Journal:  J Inorg Biochem       Date:  2021-11-12       Impact factor: 4.155

2.  Mechanism of Radical S-Adenosyl-l-methionine Adenosylation: Radical Intermediates and the Catalytic Competence of the 5'-Deoxyadenosyl Radical.

Authors:  Maike N Lundahl; Raymond Sarksian; Hao Yang; Richard J Jodts; Adrien Pagnier; Donald F Smith; Martín A Mosquera; Wilfred A van der Donk; Brian M Hoffman; William E Broderick; Joan B Broderick
Journal:  J Am Chem Soc       Date:  2022-03-08       Impact factor: 16.383

3.  HydG, the "dangler" iron, and catalytic production of free CO and CN-: implications for [FeFe]-hydrogenase maturation.

Authors:  Eric M Shepard; Stella Impano; Benjamin R Duffus; Adrien Pagnier; Kaitlin S Duschene; Jeremiah N Betz; Amanda S Byer; Amanda Galambas; Elizabeth C McDaniel; Hope Watts; Shawn E McGlynn; John W Peters; William E Broderick; Joan B Broderick
Journal:  Dalton Trans       Date:  2021-08-04       Impact factor: 4.569

  3 in total

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