Literature DB >> 33855104

Constrained generative adversarial network ensembles for sharable synthetic medical images.

Engin Dikici1, Matthew Bigelow1, Richard D White2, Barbaros S Erdal2, Luciano M Prevedello1.   

Abstract

Purpose: Sharing medical images between institutions, or even inside the same institution, is restricted by various laws and regulations; research projects requiring large datasets may suffer as a result. These limitations might be addressed by an abundant supply of synthetic data that (1) are representative (i.e., the synthetic data could produce comparable research results as the original data) and (2) do not closely resemble the original images (i.e., patient privacy is protected). We introduce a framework that generates data with these requirements leveraging generative adversarial network (GAN) ensembles in a controlled fashion. Approach: To this end, an adaptive ensemble scaling strategy with the objective of representativeness is defined. A sampled Fréchet distance-based constraint was then created to eliminate poorly converged candidates. Finally, a mutual information-based validation metric was embedded into the framework to confirm there are visual differences between the original and the generated synthetic images.
Results: The applicability of the solution is demonstrated with a case study for generating three-dimensional brain metastasis (BM) from T1-weighted contrast-enhanced MRI studies. A previously published BM detection system was reported to produce 9.12 false-positives at 90% detection sensitivity based on the original data. By using the synthetic data generated with the proposed framework, the system produced 9.53 false-positives at the same sensitivity level. Conclusions: Achieving comparable algorithm performance relying solely on synthetic data unveils a significant potential to eliminate/reduce patient privacy concerns when sharing data in medical imaging.
© 2021 Society of Photo-Optical Instrumentation Engineers (SPIE).

Entities:  

Keywords:  ensemble learning; generative adversarial networks; sharable medical imaging data; synthetic data generators

Year:  2021        PMID: 33855104      PMCID: PMC8035968          DOI: 10.1117/1.JMI.8.2.024004

Source DB:  PubMed          Journal:  J Med Imaging (Bellingham)        ISSN: 2329-4302


  10 in total

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Review 2.  A survey on deep learning in medical image analysis.

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3.  Multi-center machine learning in imaging psychiatry: A meta-model approach.

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Journal:  Neuroimage       Date:  2017-04-17       Impact factor: 6.556

4.  Learning Implicit Brain MRI Manifolds with Deep Learning.

Authors:  Camilo Bermudez; Andrew J Plassard; Taylor L Davis; Allen T Newton; Susan M Resnick; Bennett A Landman
Journal:  Proc SPIE Int Soc Opt Eng       Date:  2018-03

5.  Exploring Large-scale Public Medical Image Datasets.

Authors:  Luke Oakden-Rayner
Journal:  Acad Radiol       Date:  2019-11-06       Impact factor: 3.173

6.  Generative adversarial network in medical imaging: A review.

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Journal:  Med Image Anal       Date:  2019-08-31       Impact factor: 8.545

7.  The Cancer Imaging Archive (TCIA): maintaining and operating a public information repository.

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Review 8.  Deep Learning in Medical Image Analysis.

Authors:  Dinggang Shen; Guorong Wu; Heung-Il Suk
Journal:  Annu Rev Biomed Eng       Date:  2017-03-09       Impact factor: 9.590

9.  Alzheimer's Disease Neuroimaging Initiative (ADNI): clinical characterization.

Authors:  R C Petersen; P S Aisen; L A Beckett; M C Donohue; A C Gamst; D J Harvey; C R Jack; W J Jagust; L M Shaw; A W Toga; J Q Trojanowski; M W Weiner
Journal:  Neurology       Date:  2009-12-30       Impact factor: 9.910

10.  Automated Brain Metastases Detection Framework for T1-Weighted Contrast-Enhanced 3D MRI.

Authors:  Engin Dikici; John L Ryu; Mutlu Demirer; Matthew Bigelow; Richard D White; Wayne Slone; Barbaros Selnur Erdal; Luciano M Prevedello
Journal:  IEEE J Biomed Health Inform       Date:  2020-03-23       Impact factor: 5.772

  10 in total
  1 in total

1.  Advancing Brain Metastases Detection in T1-Weighted Contrast-Enhanced 3D MRI Using Noisy Student-Based Training.

Authors:  Engin Dikici; Xuan V Nguyen; Matthew Bigelow; John L Ryu; Luciano M Prevedello
Journal:  Diagnostics (Basel)       Date:  2022-08-21
  1 in total

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