Literature DB >> 33846507

Coevolution underlies GPCR-G protein selectivity and functionality.

Min Jae Seo1, Joongyu Heo2, Kyunghui Kim2, Ka Young Chung3, Wookyung Yu4,5.   

Abstract

G protein-coupled receptors (GPCRs) regulate diverse physiological events, which makes them as the major targets for many approved drugs. G proteins are downstream molecules that receive signals from GPCRs and trigger cell responses. The GPCR-G protein selectivity mechanism on how they properly and timely interact is still unclear. Here, we analyzed model GPCRs (i.e. HTR, DAR) and Gα proteins with a coevolutionary tool, statistical coupling analysis. The results suggested that 5-hydroxytryptamine receptors and dopamine receptors have common conserved and coevolved residues. The Gα protein also have conserved and coevolved residues. These coevolved residues were implicated in the molecular functions of the analyzed proteins. We also found specific coevolving pairs related to the selectivity between GPCR and G protein were identified. We propose that these results would contribute to better understandings of not only the functional residues of GPCRs and Gα proteins but also GPCR-G protein selectivity mechanisms.

Entities:  

Year:  2021        PMID: 33846507     DOI: 10.1038/s41598-021-87251-6

Source DB:  PubMed          Journal:  Sci Rep        ISSN: 2045-2322            Impact factor:   4.379


  49 in total

Review 1.  The G protein-coupled receptors: pharmacogenetics and disease.

Authors:  Miles D Thompson; W McIntyre Burnham; David E C Cole
Journal:  Crit Rev Clin Lab Sci       Date:  2005       Impact factor: 6.250

Review 2.  G protein--mediated signaling: same receptor, multiple effectors.

Authors:  Andrew Woehler; Evgeni G Ponimaskin
Journal:  Curr Mol Pharmacol       Date:  2009-11       Impact factor: 3.339

Review 3.  Structure-function of the G protein-coupled receptor superfamily.

Authors:  Vsevolod Katritch; Vadim Cherezov; Raymond C Stevens
Journal:  Annu Rev Pharmacol Toxicol       Date:  2012-11-08       Impact factor: 13.820

4.  A new era of GPCR structural and chemical biology.

Authors:  Sébastien Granier; Brian Kobilka
Journal:  Nat Chem Biol       Date:  2012-07-18       Impact factor: 15.040

5.  Activation mechanism of the β2-adrenergic receptor.

Authors:  Ron O Dror; Daniel H Arlow; Paul Maragakis; Thomas J Mildorf; Albert C Pan; Huafeng Xu; David W Borhani; David E Shaw
Journal:  Proc Natl Acad Sci U S A       Date:  2011-10-26       Impact factor: 11.205

Review 6.  G Protein-Coupled Receptors as Targets for Approved Drugs: How Many Targets and How Many Drugs?

Authors:  Krishna Sriram; Paul A Insel
Journal:  Mol Pharmacol       Date:  2018-01-03       Impact factor: 4.436

Review 7.  Trends in GPCR drug discovery: new agents, targets and indications.

Authors:  Alexander S Hauser; Misty M Attwood; Mathias Rask-Andersen; Helgi B Schiöth; David E Gloriam
Journal:  Nat Rev Drug Discov       Date:  2017-10-27       Impact factor: 84.694

8.  Selectivity determinants of GPCR-G-protein binding.

Authors:  Tilman Flock; Alexander S Hauser; Nadia Lund; David E Gloriam; Santhanam Balaji; M Madan Babu
Journal:  Nature       Date:  2017-05-10       Impact factor: 49.962

9.  Universal allosteric mechanism for Gα activation by GPCRs.

Authors:  Charles N J Ravarani; Dawei Sun; Tilman Flock; A J Venkatakrishnan; Melis Kayikci; Christopher G Tate; Dmitry B Veprintsev; M Madan Babu
Journal:  Nature       Date:  2015-07-06       Impact factor: 49.962

10.  Crystal structure of the β2 adrenergic receptor-Gs protein complex.

Authors:  Søren G F Rasmussen; Brian T DeVree; Yaozhong Zou; Andrew C Kruse; Ka Young Chung; Tong Sun Kobilka; Foon Sun Thian; Pil Seok Chae; Els Pardon; Diane Calinski; Jesper M Mathiesen; Syed T A Shah; Joseph A Lyons; Martin Caffrey; Samuel H Gellman; Jan Steyaert; Georgios Skiniotis; William I Weis; Roger K Sunahara; Brian K Kobilka
Journal:  Nature       Date:  2011-07-19       Impact factor: 49.962

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  3 in total

1.  Delineating the conformational landscape and intrinsic properties of the angiotensin II type 2 receptor using a computational study.

Authors:  Xiaoliang Cong; Xiaogang Zhang; Xin Liang; Xinheng He; Yehua Tang; Xing Zheng; Shaoyong Lu; Jiayou Zhang; Ting Chen
Journal:  Comput Struct Biotechnol J       Date:  2022-05-10       Impact factor: 6.155

2.  Evolutionary association of receptor-wide amino acids with G protein-coupling selectivity in aminergic GPCRs.

Authors:  Berkay Selçuk; Ismail Erol; Serdar Durdağı; Ogün Adebali
Journal:  Life Sci Alliance       Date:  2022-05-25

Review 3.  DEER Analysis of GPCR Conformational Heterogeneity.

Authors:  Matthias Elgeti; Wayne L Hubbell
Journal:  Biomolecules       Date:  2021-05-22
  3 in total

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