Literature DB >> 34067265

DEER Analysis of GPCR Conformational Heterogeneity.

Matthias Elgeti1, Wayne L Hubbell1.   

Abstract

G protein-coupled receptors (GPCRs) represent a large class of transmembrane helical proteins which are involved in numerous physiological signaling pathways and therefore represent crucial pharmacological targets. GPCR function and the action of therapeutic molecules are defined by only a few parameters, including receptor basal activity, ligand affinity, intrinsic efficacy and signal bias. These parameters are encoded in characteristic receptor conformations existing in equilibrium and their populations, which are thus of paramount interest for the understanding of receptor (mal-)functions and rational design of improved therapeutics. To this end, the combination of site-directed spin labeling and EPR spectroscopy, in particular double electron-electron resonance (DEER), is exceedingly valuable as it has access to sub-Angstrom spatial resolution and provides a detailed picture of the number and populations of conformations in equilibrium. This review gives an overview of existing DEER studies on GPCRs with a focus on the delineation of structure/function frameworks, highlighting recent developments in data analysis and visualization. We introduce "conformational efficacy" as a parameter to describe ligand-specific shifts in the conformational equilibrium, taking into account the loose coupling between receptor segments observed for different GPCRs using DEER.

Entities:  

Keywords:  7TM receptor; DEER; EPR; G protein; G protein-coupled receptor; GPCR; arrestin; electron paramagnetic resonance; function; pELDOR; structural plasticity; structure

Year:  2021        PMID: 34067265     DOI: 10.3390/biom11060778

Source DB:  PubMed          Journal:  Biomolecules        ISSN: 2218-273X


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