Literature DB >> 33834176

Mutations in BRCA1 and BRCA2 differentially affect the tumor microenvironment and response to checkpoint blockade immunotherapy.

Robert M Samstein1,2,3, Chirag Krishna4, Xiaoxiao Ma5, Xin Pei1, Ken-Wing Lee5, Vladimir Makarov6, Fengshen Kuo6, Jonathan Chung3, Raghvendra M Srivastava6, Tanaya A Purohit6, Douglas R Hoen6, Rajarsi Mandal5, Jeremy Setton1, Wei Wu5, Rachna Shah1, Besnik Qeriqi7, Qing Chang7, Sviatoslav Kendall6, Lior Braunstein1, Britta Weigelt8, Pedro Blecua Carrillo Albornoz1,9, Luc G T Morris5,6,10, Diana L Mandelker8, Jorge S Reis-Filho8, Elisa de Stanchina7, Simon N Powell1, Timothy A Chan11,12,13,14, Nadeem Riaz15,16,17.   

Abstract

Immune checkpoint blockade (ICB) has improved outcomes for patients with advanced cancer, but the determinants of response remain poorly understood. Here we report differential effects of mutations in the homologous recombination genes BRCA1 and BRCA2 on response to ICB in mouse and human tumors, and further show that truncating mutations in BRCA2 are associated with superior response compared to those in BRCA1. Mutations in BRCA1 and BRCA2 result in distinct mutational landscapes and differentially modulate the tumor-immune microenvironment, with gene expression programs related to both adaptive and innate immunity enriched in BRCA2-deficient tumors. Single-cell RNA sequencing further revealed distinct T cell, natural killer, macrophage, and dendritic cell populations enriched in BRCA2-deficient tumors. Taken together, our findings reveal the divergent effects of BRCA1 and BRCA2-deficiency on ICB outcome, and have significant implications for elucidating the genetic and microenvironmental determinants of response to immunotherapy.

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Year:  2020        PMID: 33834176      PMCID: PMC8023400          DOI: 10.1038/s43018-020-00139-8

Source DB:  PubMed          Journal:  Nat Cancer        ISSN: 2662-1347


  65 in total

Review 1.  DNA Damage and Repair Biomarkers of Immunotherapy Response.

Authors:  Kent W Mouw; Michael S Goldberg; Panagiotis A Konstantinopoulos; Alan D D'Andrea
Journal:  Cancer Discov       Date:  2017-06-19       Impact factor: 39.397

2.  Association of type and location of BRCA1 and BRCA2 mutations with risk of breast and ovarian cancer.

Authors:  Timothy R Rebbeck; Nandita Mitra; Fei Wan; Olga M Sinilnikova; Sue Healey; Lesley McGuffog; Sylvie Mazoyer; Georgia Chenevix-Trench; Douglas F Easton; Antonis C Antoniou; Katherine L Nathanson; Yael Laitman; Anya Kushnir; Shani Paluch-Shimon; Raanan Berger; Jamal Zidan; Eitan Friedman; Hans Ehrencrona; Marie Stenmark-Askmalm; Zakaria Einbeigi; Niklas Loman; Katja Harbst; Johanna Rantala; Beatrice Melin; Dezheng Huo; Olufunmilayo I Olopade; Joyce Seldon; Patricia A Ganz; Robert L Nussbaum; Salina B Chan; Kunle Odunsi; Simon A Gayther; Susan M Domchek; Banu K Arun; Karen H Lu; Gillian Mitchell; Beth Y Karlan; Christine Walsh; Jenny Lester; Andrew K Godwin; Harsh Pathak; Eric Ross; Mary B Daly; Alice S Whittemore; Esther M John; Alexander Miron; Mary Beth Terry; Wendy K Chung; David E Goldgar; Saundra S Buys; Ramunas Janavicius; Laima Tihomirova; Nadine Tung; Cecilia M Dorfling; Elizabeth J van Rensburg; Linda Steele; Susan L Neuhausen; Yuan Chun Ding; Bent Ejlertsen; Anne-Marie Gerdes; Thomas v O Hansen; Teresa Ramón y Cajal; Ana Osorio; Javier Benitez; Javier Godino; Maria-Isabel Tejada; Mercedes Duran; Jeffrey N Weitzel; Kristie A Bobolis; Sharon R Sand; Annette Fontaine; Antonella Savarese; Barbara Pasini; Bernard Peissel; Bernardo Bonanni; Daniela Zaffaroni; Francesca Vignolo-Lutati; Giulietta Scuvera; Giuseppe Giannini; Loris Bernard; Maurizio Genuardi; Paolo Radice; Riccardo Dolcetti; Siranoush Manoukian; Valeria Pensotti; Viviana Gismondi; Drakoulis Yannoukakos; Florentia Fostira; Judy Garber; Diana Torres; Muhammad Usman Rashid; Ute Hamann; Susan Peock; Debra Frost; Radka Platte; D Gareth Evans; Rosalind Eeles; Rosemarie Davidson; Diana Eccles; Trevor Cole; Jackie Cook; Carole Brewer; Shirley Hodgson; Patrick J Morrison; Lisa Walker; Mary E Porteous; M John Kennedy; Louise Izatt; Julian Adlard; Alan Donaldson; Steve Ellis; Priyanka Sharma; Rita Katharina Schmutzler; Barbara Wappenschmidt; Alexandra Becker; Kerstin Rhiem; Eric Hahnen; Christoph Engel; Alfons Meindl; Stefanie Engert; Nina Ditsch; Norbert Arnold; Hans Jörg Plendl; Christoph Mundhenke; Dieter Niederacher; Markus Fleisch; Christian Sutter; C R Bartram; Nicola Dikow; Shan Wang-Gohrke; Dorothea Gadzicki; Doris Steinemann; Karin Kast; Marit Beer; Raymonda Varon-Mateeva; Andrea Gehrig; Bernhard H Weber; Dominique Stoppa-Lyonnet; Olga M Sinilnikova; Sylvie Mazoyer; Claude Houdayer; Muriel Belotti; Marion Gauthier-Villars; Francesca Damiola; Nadia Boutry-Kryza; Christine Lasset; Hagay Sobol; Jean-Philippe Peyrat; Danièle Muller; Jean-Pierre Fricker; Marie-Agnès Collonge-Rame; Isabelle Mortemousque; Catherine Nogues; Etienne Rouleau; Claudine Isaacs; Anne De Paepe; Bruce Poppe; Kathleen Claes; Kim De Leeneer; Marion Piedmonte; Gustavo Rodriguez; Katie Wakely; John Boggess; Stephanie V Blank; Jack Basil; Masoud Azodi; Kelly-Anne Phillips; Trinidad Caldes; Miguel de la Hoya; Atocha Romero; Heli Nevanlinna; Kristiina Aittomäki; Annemarie H van der Hout; Frans B L Hogervorst; Senno Verhoef; J Margriet Collée; Caroline Seynaeve; Jan C Oosterwijk; Johannes J P Gille; Juul T Wijnen; Encarna B Gómez Garcia; Carolien M Kets; Margreet G E M Ausems; Cora M Aalfs; Peter Devilee; Arjen R Mensenkamp; Ava Kwong; Edith Olah; Janos Papp; Orland Diez; Conxi Lazaro; Esther Darder; Ignacio Blanco; Mónica Salinas; Anna Jakubowska; Jan Lubinski; Jacek Gronwald; Katarzyna Jaworska-Bieniek; Katarzyna Durda; Grzegorz Sukiennicki; Tomasz Huzarski; Tomasz Byrski; Cezary Cybulski; Aleksandra Toloczko-Grabarek; Elżbieta Złowocka-Perłowska; Janusz Menkiszak; Adalgeir Arason; Rosa B Barkardottir; Jacques Simard; Rachel Laframboise; Marco Montagna; Simona Agata; Elisa Alducci; Ana Peixoto; Manuel R Teixeira; Amanda B Spurdle; Min Hyuk Lee; Sue K Park; Sung-Won Kim; Tara M Friebel; Fergus J Couch; Noralane M Lindor; Vernon S Pankratz; Lucia Guidugli; Xianshu Wang; Marc Tischkowitz; Lenka Foretova; Joseph Vijai; Kenneth Offit; Mark Robson; Rohini Rau-Murthy; Noah Kauff; Anneliese Fink-Retter; Christian F Singer; Christine Rappaport; Daphne Gschwantler-Kaulich; Georg Pfeiler; Muy-Kheng Tea; Andreas Berger; Mark H Greene; Phuong L Mai; Evgeny N Imyanitov; Amanda Ewart Toland; Leigha Senter; Anders Bojesen; Inge Sokilde Pedersen; Anne-Bine Skytte; Lone Sunde; Mads Thomassen; Sanne Traasdahl Moeller; Torben A Kruse; Uffe Birk Jensen; Maria Adelaide Caligo; Paolo Aretini; Soo-Hwang Teo; Christina G Selkirk; Peter J Hulick; Irene Andrulis
Journal:  JAMA       Date:  2015-04-07       Impact factor: 56.272

3.  Genetic basis for clinical response to CTLA-4 blockade in melanoma.

Authors:  Alexandra Snyder; Vladimir Makarov; Taha Merghoub; Jianda Yuan; Jedd D Wolchok; Timothy A Chan; Jesse M Zaretsky; Alexis Desrichard; Logan A Walsh; Michael A Postow; Phillip Wong; Teresa S Ho; Travis J Hollmann; Cameron Bruggeman; Kasthuri Kannan; Yanyun Li; Ceyhan Elipenahli; Cailian Liu; Christopher T Harbison; Lisu Wang; Antoni Ribas
Journal:  N Engl J Med       Date:  2014-11-19       Impact factor: 91.245

4.  Mismatch repair deficiency predicts response of solid tumors to PD-1 blockade.

Authors:  Dung T Le; Jennifer N Durham; Kellie N Smith; Hao Wang; Bjarne R Bartlett; Laveet K Aulakh; Steve Lu; Holly Kemberling; Cara Wilt; Brandon S Luber; Fay Wong; Nilofer S Azad; Agnieszka A Rucki; Dan Laheru; Ross Donehower; Atif Zaheer; George A Fisher; Todd S Crocenzi; James J Lee; Tim F Greten; Austin G Duffy; Kristen K Ciombor; Aleksandra D Eyring; Bao H Lam; Andrew Joe; S Peter Kang; Matthias Holdhoff; Ludmila Danilova; Leslie Cope; Christian Meyer; Shibin Zhou; Richard M Goldberg; Deborah K Armstrong; Katherine M Bever; Amanda N Fader; Janis Taube; Franck Housseau; David Spetzler; Nianqing Xiao; Drew M Pardoll; Nickolas Papadopoulos; Kenneth W Kinzler; James R Eshleman; Bert Vogelstein; Robert A Anders; Luis A Diaz
Journal:  Science       Date:  2017-06-08       Impact factor: 47.728

5.  Cancer immunology. Mutational landscape determines sensitivity to PD-1 blockade in non-small cell lung cancer.

Authors:  Naiyer A Rizvi; Matthew D Hellmann; Alexandra Snyder; Pia Kvistborg; Vladimir Makarov; Jonathan J Havel; William Lee; Jianda Yuan; Phillip Wong; Teresa S Ho; Martin L Miller; Natasha Rekhtman; Andre L Moreira; Fawzia Ibrahim; Cameron Bruggeman; Billel Gasmi; Roberta Zappasodi; Yuka Maeda; Chris Sander; Edward B Garon; Taha Merghoub; Jedd D Wolchok; Ton N Schumacher; Timothy A Chan
Journal:  Science       Date:  2015-03-12       Impact factor: 47.728

6.  Genomic and Transcriptomic Features of Response to Anti-PD-1 Therapy in Metastatic Melanoma.

Authors:  Willy Hugo; Jesse M Zaretsky; Lu Sun; Chunying Song; Blanca Homet Moreno; Siwen Hu-Lieskovan; Beata Berent-Maoz; Jia Pang; Bartosz Chmielowski; Grace Cherry; Elizabeth Seja; Shirley Lomeli; Xiangju Kong; Mark C Kelley; Jeffrey A Sosman; Douglas B Johnson; Antoni Ribas; Roger S Lo
Journal:  Cell       Date:  2016-03-17       Impact factor: 41.582

7.  Alterations in DNA Damage Response and Repair Genes as Potential Marker of Clinical Benefit From PD-1/PD-L1 Blockade in Advanced Urothelial Cancers.

Authors:  Min Yuen Teo; Kenneth Seier; Irina Ostrovnaya; Ashley M Regazzi; Brooke E Kania; Meredith M Moran; Catharine K Cipolla; Mark J Bluth; Joshua Chaim; Hikmat Al-Ahmadie; Alexandra Snyder; Maria I Carlo; David B Solit; Michael F Berger; Samuel Funt; Jedd D Wolchok; Gopa Iyer; Dean F Bajorin; Margaret K Callahan; Jonathan E Rosenberg
Journal:  J Clin Oncol       Date:  2018-02-28       Impact factor: 44.544

Review 8.  The therapeutic significance of mutational signatures from DNA repair deficiency in cancer.

Authors:  Jennifer Ma; Jeremy Setton; Nancy Y Lee; Nadeem Riaz; Simon N Powell
Journal:  Nat Commun       Date:  2018-08-17       Impact factor: 14.919

9.  Activity of durvalumab plus olaparib in metastatic castration-resistant prostate cancer in men with and without DNA damage repair mutations.

Authors:  Fatima Karzai; David VanderWeele; Ravi A Madan; Helen Owens; Lisa M Cordes; Amy Hankin; Anna Couvillon; Erin Nichols; Marijo Bilusic; Michael L Beshiri; Kathleen Kelly; Venkatesh Krishnasamy; Sunmin Lee; Min-Jung Lee; Akira Yuno; Jane B Trepel; Maria J Merino; Ryan Dittamore; Jennifer Marté; Renee N Donahue; Jeffrey Schlom; Keith J Killian; Paul S Meltzer; Seth M Steinberg; James L Gulley; Jung-Min Lee; William L Dahut
Journal:  J Immunother Cancer       Date:  2018-12-04       Impact factor: 13.751

10.  Clonal neoantigens elicit T cell immunoreactivity and sensitivity to immune checkpoint blockade.

Authors:  Nicholas McGranahan; Andrew J S Furness; Rachel Rosenthal; Sofie Ramskov; Rikke Lyngaa; Sunil Kumar Saini; Mariam Jamal-Hanjani; Gareth A Wilson; Nicolai J Birkbak; Crispin T Hiley; Thomas B K Watkins; Seema Shafi; Nirupa Murugaesu; Richard Mitter; Ayse U Akarca; Joseph Linares; Teresa Marafioti; Jake Y Henry; Eliezer M Van Allen; Diana Miao; Bastian Schilling; Dirk Schadendorf; Levi A Garraway; Vladimir Makarov; Naiyer A Rizvi; Alexandra Snyder; Matthew D Hellmann; Taha Merghoub; Jedd D Wolchok; Sachet A Shukla; Catherine J Wu; Karl S Peggs; Timothy A Chan; Sine R Hadrup; Sergio A Quezada; Charles Swanton
Journal:  Science       Date:  2016-03-03       Impact factor: 47.728

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  37 in total

1.  PROactively TACkling CDK4/6 therapy resistance.

Authors:  Signe Caksa; Andrew E Aplin
Journal:  Nat Cancer       Date:  2021-04

2.  Avelumab maintenance in advanced urothelial carcinoma: biomarker analysis of the phase 3 JAVELIN Bladder 100 trial.

Authors:  Thomas Powles; Srikala S Sridhar; Yohann Loriot; Joaquim Bellmunt; Xinmeng Jasmine Mu; Keith A Ching; Jie Pu; Cora N Sternberg; Daniel P Petrylak; Rosa Tambaro; Louis M Dourthe; Carlos Alvarez-Fernandez; Maureen Aarts; Alessandra di Pietro; Petros Grivas; Craig B Davis
Journal:  Nat Med       Date:  2021-12-10       Impact factor: 53.440

3.  Functional landscapes of POLE and POLD1 mutations in checkpoint blockade-dependent antitumor immunity.

Authors:  Xiaoxiao Ma; Nadeem Riaz; Robert M Samstein; Mark Lee; Vladimir Makarov; Cristina Valero; Diego Chowell; Fengshen Kuo; Douglas Hoen; Conall W R Fitzgerald; Hui Jiang; Jonathan Alektiar; Tyler J Alban; Ivan Juric; Prerana Bangalore Parthasarathy; Yu Zhao; Erich Y Sabio; Richa Verma; Raghvendra M Srivastava; Lynda Vuong; Wei Yang; Xiao Zhang; Jingming Wang; Lawrence K Chu; Stephen L Wang; Daniel W Kelly; Xin Pei; Jiapeng Chen; Rona Yaeger; Dmitriy Zamarin; Ahmet Zehir; Mithat Gönen; Luc G T Morris; Timothy A Chan
Journal:  Nat Genet       Date:  2022-07-11       Impact factor: 41.307

4.  An immune-inflamed tumor microenvironment as defined by CD8 score is associated with favorable oncologic outcomes in hepatocellular carcinoma independent of measures of tumor mutational burden.

Authors:  Leonid Cherkassky; Masanori Oshi; Eihab Abdelfatah; Rongrong Wu; Yamato Takabe; Li Yan; Itaru Endo; Kazuaki Takabe
Journal:  Am J Cancer Res       Date:  2022-07-15       Impact factor: 5.942

5.  PD-L1 in Breast Cancer: The Road to the Perfect BiomarkerIs Fraught With Uncertainty.

Authors:  Bora Lim
Journal:  J Natl Cancer Inst       Date:  2021-08-02       Impact factor: 13.506

Review 6.  BRCA mutated pancreatic cancer: A change is coming.

Authors:  Michael N Rosen; Rachel A Goodwin; Michael M Vickers
Journal:  World J Gastroenterol       Date:  2021-05-07       Impact factor: 5.742

Review 7.  Homologous recombination deficiency: how genomic signatures are generated.

Authors:  Jeremy Setton; Jorge S Reis-Filho; Simon N Powell
Journal:  Curr Opin Genet Dev       Date:  2021-01-18       Impact factor: 5.578

Review 8.  Homologous Recombination Repair Deficiency and Implications for Tumor Immunogenicity.

Authors:  Sandra van Wilpe; Sofie H Tolmeijer; Rutger H T Koornstra; I Jolanda M de Vries; Winald R Gerritsen; Marjolijn Ligtenberg; Niven Mehra
Journal:  Cancers (Basel)       Date:  2021-05-07       Impact factor: 6.639

9.  Treatment of Fanconi Anemia-Associated Head and Neck Cancer: Opportunities to Improve Outcomes.

Authors:  Rex H Lee; Hyunseok Kang; Sue S Yom; Agata Smogorzewska; Daniel E Johnson; Jennifer R Grandis
Journal:  Clin Cancer Res       Date:  2021-10-01       Impact factor: 12.531

10.  Pancreas cancer and BRCA: A critical subset of patients with improving therapeutic outcomes.

Authors:  Parisa Momtaz; Catherine A O'Connor; Joanne F Chou; Marinela Capanu; Wungki Park; Chaitanya Bandlamudi; Michael F Berger; David P Kelsen; Sarah P Suehnholz; Debyani Chakravarty; Kenneth H Yu; Anna M Varghese; Alice Zervoudakis; Jia Li; Geoffrey Y Ku; Jennifer S Park; Marina Shcherba; James J Harding; Zoe Goldberg; Ghassan K Abou-Alfa; Erin E Salo-Mullen; Zsofia K Stadler; Christine A Iacobuzio-Donahue; Eileen M O'Reilly
Journal:  Cancer       Date:  2021-08-05       Impact factor: 6.921

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