Literature DB >> 33817247

Automatic detection and segmentation of adenomatous colorectal polyps during colonoscopy using Mask R-CNN.

Jie Meng1,2, Linyan Xue3, Ying Chang2, Jianguang Zhang2, Shilong Chang3, Kun Liu3, Shuang Liu3, Bangmao Wang1, Kun Yang3.   

Abstract

Colorectal cancer (CRC) is one of the main alimentary tract system malignancies affecting people worldwide. Adenomatous polyps are precursors of CRC, and therefore, preventing the development of these lesions may also prevent subsequent malignancy. However, the adenoma detection rate (ADR), a measure of the ability of a colonoscopist to identify and remove precancerous colorectal polyps, varies significantly among endoscopists. Here, we attempt to use a convolutional neural network (CNN) to generate a unique computer-aided diagnosis (CAD) system by exploring in detail the multiple-scale performance of deep neural networks. We applied this system to 3,375 hand-labeled images from the screening colonoscopies of 1,197 patients; of whom, 3,045 were assigned to the training dataset and 330 to the testing dataset. The images were diagnosed simply as either an adenomatous or non-adenomatous polyp. When applied to the testing dataset, our CNN-CAD system achieved a mean average precision of 89.5%. We conclude that the proposed framework could increase the ADR and decrease the incidence of interval CRCs, although further validation through large multicenter trials is required.
© 2020 Jie Meng et al., published by De Gruyter.

Entities:  

Keywords:  CAD; CNN; CRC; adenomatous polyps; colonoscopy

Year:  2020        PMID: 33817247      PMCID: PMC7968546          DOI: 10.1515/biol-2020-0055

Source DB:  PubMed          Journal:  Open Life Sci        ISSN: 2391-5412            Impact factor:   0.938


  22 in total

Review 1.  Guidelines for colonoscopy surveillance after screening and polypectomy: a consensus update by the US Multi-Society Task Force on Colorectal Cancer.

Authors:  David A Lieberman; Douglas K Rex; Sidney J Winawer; Francis M Giardiello; David A Johnson; Theodore R Levin
Journal:  Gastroenterology       Date:  2012-07-03       Impact factor: 22.682

2.  Automated Polyp Detection in Colonoscopy Videos Using Shape and Context Information.

Authors:  Nima Tajbakhsh; Suryakanth R Gurudu; Jianming Liang
Journal:  IEEE Trans Med Imaging       Date:  2015-10-08       Impact factor: 10.048

3.  Polyp-Alert: near real-time feedback during colonoscopy.

Authors:  Yi Wang; Wallapak Tavanapong; Johnny Wong; Jung Hwan Oh; Piet C de Groen
Journal:  Comput Methods Programs Biomed       Date:  2015-04-18       Impact factor: 5.428

4.  Enhancing deep convolutional neural network scheme for breast cancer diagnosis with unlabeled data.

Authors:  Wenqing Sun; Tzu-Liang Bill Tseng; Jianying Zhang; Wei Qian
Journal:  Comput Med Imaging Graph       Date:  2016-07-19       Impact factor: 4.790

Review 5.  Colorectal cancer: molecules and populations.

Authors:  J D Potter
Journal:  J Natl Cancer Inst       Date:  1999-06-02       Impact factor: 13.506

6.  Automatic Detection and Classification of Colorectal Polyps by Transferring Low-Level CNN Features From Nonmedical Domain.

Authors:  Ruikai Zhang; Yali Zheng; Tony Wing Chung Mak; Ruoxi Yu; Sunny H Wong; James Y W Lau; Carmen C Y Poon
Journal:  IEEE J Biomed Health Inform       Date:  2016-12-05       Impact factor: 5.772

7.  Long-term colorectal-cancer mortality after adenoma removal.

Authors:  Magnus Løberg; Mette Kalager; Øyvind Holme; Geir Hoff; Hans-Olov Adami; Michael Bretthauer
Journal:  N Engl J Med       Date:  2014-08-28       Impact factor: 91.245

8.  American College of Gastroenterology guidelines for colorectal cancer screening 2009 [corrected].

Authors:  Douglas K Rex; David A Johnson; Joseph C Anderson; Phillip S Schoenfeld; Carol A Burke; John M Inadomi
Journal:  Am J Gastroenterol       Date:  2009-02-24       Impact factor: 10.864

9.  Global cancer statistics 2018: GLOBOCAN estimates of incidence and mortality worldwide for 36 cancers in 185 countries.

Authors:  Freddie Bray; Jacques Ferlay; Isabelle Soerjomataram; Rebecca L Siegel; Lindsey A Torre; Ahmedin Jemal
Journal:  CA Cancer J Clin       Date:  2018-09-12       Impact factor: 508.702

10.  Colonoscopy: quality indicators.

Authors:  Joseph C Anderson; Lynn F Butterly
Journal:  Clin Transl Gastroenterol       Date:  2015-02-26       Impact factor: 4.488

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  1 in total

1.  Weakly Supervised Polyp Segmentation in Colonoscopy Images Using Deep Neural Networks.

Authors:  Siwei Chen; Gregor Urban; Pierre Baldi
Journal:  J Imaging       Date:  2022-04-22
  1 in total

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