Literature DB >> 26462083

Automated Polyp Detection in Colonoscopy Videos Using Shape and Context Information.

Nima Tajbakhsh, Suryakanth R Gurudu, Jianming Liang.   

Abstract

This paper presents the culmination of our research in designing a system for computer-aided detection (CAD) of polyps in colonoscopy videos. Our system is based on a hybrid context-shape approach, which utilizes context information to remove non-polyp structures and shape information to reliably localize polyps. Specifically, given a colonoscopy image, we first obtain a crude edge map. Second, we remove non-polyp edges from the edge map using our unique feature extraction and edge classification scheme. Third, we localize polyp candidates with probabilistic confidence scores in the refined edge maps using our novel voting scheme. The suggested CAD system has been tested using two public polyp databases, CVC-ColonDB, containing 300 colonoscopy images with a total of 300 polyp instances from 15 unique polyps, and ASU-Mayo database, which is our collection of colonoscopy videos containing 19,400 frames and a total of 5,200 polyp instances from 10 unique polyps. We have evaluated our system using free-response receiver operating characteristic (FROC) analysis. At 0.1 false positives per frame, our system achieves a sensitivity of 88.0% for CVC-ColonDB and a sensitivity of 48% for the ASU-Mayo database. In addition, we have evaluated our system using a new detection latency analysis where latency is defined as the time from the first appearance of a polyp in the colonoscopy video to the time of its first detection by our system. At 0.05 false positives per frame, our system yields a polyp detection latency of 0.3 seconds.

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Mesh:

Year:  2015        PMID: 26462083     DOI: 10.1109/TMI.2015.2487997

Source DB:  PubMed          Journal:  IEEE Trans Med Imaging        ISSN: 0278-0062            Impact factor:   10.048


  36 in total

Review 1.  Computer-aided diagnosis for colonoscopy.

Authors:  Yuichi Mori; Shin-Ei Kudo; Tyler M Berzin; Masashi Misawa; Kenichi Takeda
Journal:  Endoscopy       Date:  2017-05-24       Impact factor: 10.093

2.  A novel summary report of colonoscopy: timeline visualization providing meaningful colonoscopy video information.

Authors:  Minwoo Cho; Jee Hyun Kim; Hyoun Joong Kong; Kyoung Sup Hong; Sungwan Kim
Journal:  Int J Colorectal Dis       Date:  2018-03-08       Impact factor: 2.571

3.  Computer-aided detection and visualization of pulmonary embolism using a novel, compact, and discriminative image representation.

Authors:  Nima Tajbakhsh; Jae Y Shin; Michael B Gotway; Jianming Liang
Journal:  Med Image Anal       Date:  2019-08-06       Impact factor: 8.545

4.  FRCNet: Feature Refining and Context-Guided Network for Efficient Polyp Segmentation.

Authors:  Liantao Shi; Yufeng Wang; Zhengguo Li; Wen Qiumiao
Journal:  Front Bioeng Biotechnol       Date:  2022-06-29

5.  Guest Editorial Annotation-Efficient Deep Learning: The Holy Grail of Medical Imaging.

Authors:  Nima Tajbakhsh; Holger Roth; Demetri Terzopoulos; Jianming Liang
Journal:  IEEE Trans Med Imaging       Date:  2021-09-30       Impact factor: 11.037

Review 6.  Artificial Intelligence and Polyp Detection.

Authors:  Nicholas Hoerter; Seth A Gross; Peter S Liang
Journal:  Curr Treat Options Gastroenterol       Date:  2020-01-21

Review 7.  Artificial Intelligence-Based Polyp Detection in Colonoscopy: Where Have We Been, Where Do We Stand, and Where Are We Headed?

Authors:  Thomas Wittenberg; Martin Raithel
Journal:  Visc Med       Date:  2020-11-12

8.  Exploring Deep Learning and Transfer Learning for Colonic Polyp Classification.

Authors:  Eduardo Ribeiro; Andreas Uhl; Georg Wimmer; Michael Häfner
Journal:  Comput Math Methods Med       Date:  2016-10-26       Impact factor: 2.238

Review 9.  Application of Artificial Intelligence in the Detection and Characterization of Colorectal Neoplasm.

Authors:  Kyeong Ok Kim; Eun Young Kim
Journal:  Gut Liver       Date:  2021-05-15       Impact factor: 4.519

10.  A Benchmark for Endoluminal Scene Segmentation of Colonoscopy Images.

Authors:  David Vázquez; Jorge Bernal; F Javier Sánchez; Gloria Fernández-Esparrach; Antonio M López; Adriana Romero; Michal Drozdzal; Aaron Courville
Journal:  J Healthc Eng       Date:  2017-07-26       Impact factor: 2.682

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