Literature DB >> 33812316

Intrinsically disordered proteins and biomolecular condensates as drug targets.

Mateusz Biesaga1, Marta Frigolé-Vivas1, Xavier Salvatella2.   

Abstract

Intrinsically disordered domains represent attractive therapeutic targets because they play key roles in cancer, as well as in neurodegenerative and infectious diseases. They are, however, considered undruggable because they do not form stable binding pockets for small molecules and, therefore, have not been prioritized in drug discovery. Under physiological solution conditions many biomedically relevant intrinsically disordered proteins undergo phase separation processes leading to the formation of mesoscopic highly dynamic assemblies, generally known as biomolecular condensates that define environments that can be quite different from the solutions surrounding them. In what follows, we review key recent findings in this area and show how biomolecular condensation can offer opportunities for modulating the activities of intrinsically disordered targets.
Copyright © 2021 Elsevier Ltd. All rights reserved.

Entities:  

Keywords:  Biomolecular condensates; Drug discovery; Free energy landscape; Intrinsically disordered proteins

Year:  2021        PMID: 33812316     DOI: 10.1016/j.cbpa.2021.02.009

Source DB:  PubMed          Journal:  Curr Opin Chem Biol        ISSN: 1367-5931            Impact factor:   8.822


  7 in total

1.  More is simpler: Decomposition of ligand-binding affinity for proteins being disordered.

Authors:  Xiaohui Wang; Bin Chong; Zhaoxi Sun; Hao Ruan; Yingguang Yang; Pengbo Song; Zhirong Liu
Journal:  Protein Sci       Date:  2022-07       Impact factor: 6.993

2.  Characterizing Properties of Biomolecular Condensates Below the Diffraction Limit In Vivo.

Authors:  Ganesh Pandey; Alisha Budhathoki; Jan-Hendrik Spille
Journal:  Methods Mol Biol       Date:  2023

Review 3.  Intrinsically Disordered Proteins: Critical Components of the Wetware.

Authors:  Prakash Kulkarni; Supriyo Bhattacharya; Srisairam Achuthan; Amita Behal; Mohit Kumar Jolly; Sourabh Kotnala; Atish Mohanty; Govindan Rangarajan; Ravi Salgia; Vladimir Uversky
Journal:  Chem Rev       Date:  2022-02-16       Impact factor: 72.087

4.  Low amounts of heavy water increase the phase separation propensity of a fragment of the androgen receptor activation domain.

Authors:  Stasė Bielskutė; Carla Garcia-Cabau; Marta Frigolé-Vivas; Elzbieta Szulc; Eva De Mol; Mireia Pesarrodona; Jesús García; Xavier Salvatella
Journal:  Protein Sci       Date:  2021-05-24       Impact factor: 6.993

5.  Structural Protein Analysis of Driver Gene Mutations in Conjunctival Melanoma.

Authors:  Mak B Djulbegovic; Vladimir N Uversky; J William Harbour; Anat Galor; Carol L Karp
Journal:  Genes (Basel)       Date:  2021-10-15       Impact factor: 4.096

Review 6.  Deep learning in prediction of intrinsic disorder in proteins.

Authors:  Bi Zhao; Lukasz Kurgan
Journal:  Comput Struct Biotechnol J       Date:  2022-03-08       Impact factor: 7.271

7.  IDPConformerGenerator: A Flexible Software Suite for Sampling the Conformational Space of Disordered Protein States.

Authors:  João M C Teixeira; Zi Hao Liu; Ashley Namini; Jie Li; Robert M Vernon; Mickaël Krzeminski; Alaa A Shamandy; Oufan Zhang; Mojtaba Haghighatlari; Lei Yu; Teresa Head-Gordon; Julie D Forman-Kay
Journal:  J Phys Chem A       Date:  2022-08-28       Impact factor: 2.944

  7 in total

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