| Literature DB >> 33808557 |
Iolia Akaev1, Siavash Rahimi1,2, Olubukola Onifade3, Francis John Edward Gardner4, David Castells-Rufas5, Eleanor Jones6, Shyamika Acharige6, Chit Cheng Yeoh6.
Abstract
The aim of this audit was to evaluate the usefulness and serviceability of testing for pathogenic mutations in BRCA1 or BRCA2 (BRCA1/2) genes in ovarian cancer (OC) patients. One hundred and thirty-five patients with more common histological sub-types of OC were retrospectively identified between 2011 and 2019. The fail rate of the molecular analysis was 7.4% (10/135). One hundred and twenty-five records were evaluated: 99 (79.2%) patients had wild-type BRCA (both somatic and germline); tumour BRCA1/2 (tBRCA1/2) pathogenic mutations were found in 20 (16%) patients with distribution between BRCA1 and BRCA2 being 40% and 60%, respectively; 13 (10.4%) patients with pathogenic variants had germline mutations; and tBRCA1/2 with variant of unknown significance (VUS), in the absence of pathogenic BRCA1 or BRCA2 variants, was detected in 6 (4.8%) patients. Our data show that expanding the molecular service to the routine first-tumour testing for patients with OC will potentially increase the detection rate of BRCA mutations, thereby providing early benefits of PARP inhibitors therapy. The tumour testing service should continue to be offered to newly diagnosed patients with high-grade epithelial cancers, including high-grade serous carcinoma, but also with carcinosarcomas and poorly-differentiated metastatic adenocarcinomas of unknown origin.Entities:
Keywords: BRCA1; BRCA2; NGS; PARP; carcinoma; ovarian; service; somatic; tumour
Year: 2021 PMID: 33808557 PMCID: PMC8003427 DOI: 10.3390/diagnostics11030547
Source DB: PubMed Journal: Diagnostics (Basel) ISSN: 2075-4418
The distribution of results between different tumour subtypes from BRCA1/2 testing.
| Results | HGSC 1 | EAdCa 2 | CCC 3 | CRS 4 | Met. AdCa (G3) 5 | Total |
|---|---|---|---|---|---|---|
| WT 6 g | 77 | 13 | 5 | 2 | 2 | 99 (79.2%) |
| WT g | 0 | 1 | 2 | 0 | 0 | 3 (2.4%) |
| VUS in g | 1 | 1 | 0 | 1 | 0 | 3 (2.4%) |
| Pathogenic g | 11 | 0 | 0 | 1 | 1 | 13 (10.4%) |
| WT g | 5 | 2 | 0 | 0 | 0 | 7 (5.6%) |
| Total | 94 | 17 | 7 | 4 | 3 | 125 |
1 HGSC = high-grade serous carcinoma; 2 EAdCa = endometrioid adenocarcinoma; 3 CCC = clear cell carcinoma; 4 CRS = carcinosarcoma; 5 Met. AdCa (G3) = metastatic poorly differentiated adenocarcinoma; 6 WT = wild-type; 7 VUS = variants of unknown significance.
Results from patients with detected variants of unknown significance (VUS) (samples 1–6), and pathogenic variants in gBRCA1/2 and sBRCA1/2 (samples 7–19), or sBRCA1/2 (samples 20–26).
| № | Diagnosis | Tissue | g | s |
|---|---|---|---|---|
| 1 | CCC 2 | Adnexum * | WT 3 | Not detected, but VUS in 32% of reads in |
| 2 | HGSC 4 | Adnexum | VUS | Not detected, but VUS in |
| 3 | EAdCa 5 | Ovary | VUS | Not detected, but VUS in |
| 4 | EAdCa | Ovary | WT | Not detected, but VUS in |
| 5 | CRS 6 | Adnexum | VUS | Not detected, but VUS 58% of reads in |
| 6 | CCC | Ovary | WT | Not detected, but VUS in 63% of reads in |
| 7 | HGSC | Ovary | 40% reads, | |
| 8 | HGSC | Adnexum | 77% reads, | |
| 9 | HGSC | Ovary | 91% reads, | |
| 10 | HGSC | Ovary | 39% reads, | |
| 11 | HGSC | Omentum | 57% reads, | |
| 12 | Met.AdCa (G3) 9 | Omentum | 58% reads, | |
| 13 | HGSC | Omentum | 89% reads, | |
| 14 | HGSC | Omentum | 91% reads, | |
| 15 | CRS | Adnexum | 91% reads, | |
| 16 | HGSC | Ovary | 70% reads, | |
| 17 | HGSC | Cell clot ** | 22% reads, | |
| 18 | HGSC | Ovary | 66% reads, | |
| 19 | HGSC | Omentum | 59% reads, | |
| 20 | HGSC | Ovary | WT | 45% reads, |
| 21 | HGSC | Ovary | WT | 64% reads, |
| 22 | HGSC | Omentum | WT | 52% reads, |
| 23 | HGSC | Ovary | WT | 73% reads, |
| 24 | HGSC | Omentum | WT | 44% reads, |
| 25 | EAdCa | Omentum | WT | 42% reads, |
| 26 | EAdCa | Ovary | WT | 8% reads, BRCA2 nonsense mutation c.6385G>T p.(Glu2129Ter) |
1 VUS = variants of unknown significance; 2 CCC = clear cell carcinoma; 3 WT = wild-type; 4 HGSC = high-grade serous carcinoma; 5 EAdCa = endometrioid adenocarcinoma; 6 CRS = carcinosarcoma; 7 BRCA1m/8 BRCA2m = pathogenic mutation in BRCA1 or BRCA2 genes; 9 Met. AdCa (G3) = metastatic poorly differentiated adenocarcinoma; * = the term ‘’adnexum’’ is used because the primary site (ovary or fallopian tube) cannot be established; ** = cell clot from ascites.