Literature DB >> 33807840

Clinical Utility of Next-Generation Sequencing-Based Panel Testing under the Universal Health-Care System in Japan: A Retrospective Analysis at a Single University Hospital.

Chiaki Inagaki1, Daichi Maeda2, Kazue Hatake3, Yuki Sato4, Kae Hashimoto4,5, Daisuke Sakai3, Shinichi Yachida3,6, Iwao Nonomura3,7, Taroh Satoh1.   

Abstract

Next-generation sequencing (NGS) assay is part of routine care in Japan owing to its reimbursement by Japan's universal health-care system; however, reimbursement is limited to patients who finished standard treatment. We retrospectively investigated 221 patients who underwent Foundation One CDX (F1CDx) at our hospital. Every F1CDx result was assessed at the molecular tumor board (MTB) for treatment recommendation. Based on patients' preferences, presumed germline findings were also assessed at the MTB and disclosed at the clinic. In total, 204 patients underwent F1CDx and 195 patients completed the analysis; however, 13.8% of them could not receive the report due to disease progression. Among 168 patients who received the results, 41.6% had at least one actionable alteration, and 3.6% received genomically matched treatment. Presumed germline findings were nominated in 24 patients, and 16.7% of them contacted a geneticist counselor. The NGS assay should be performed earlier in the clinical course to maximize the clinical benefit. Broader reimbursement for the NGS assay would enhance the delivery of precision oncology to patients. Access to clinical trials affects the number of patients who benefit from NGS. Additionally, the disclosure of presumed germline findings is feasible in clinical practice.

Entities:  

Keywords:  next-generation sequencing; precision medicine; presumed germline findings; solid cancer; universal health-care system

Year:  2021        PMID: 33807840      PMCID: PMC7961835          DOI: 10.3390/cancers13051121

Source DB:  PubMed          Journal:  Cancers (Basel)        ISSN: 2072-6694            Impact factor:   6.639


  28 in total

Review 1.  Precision Oncology Decision Support: Current Approaches and Strategies for the Future.

Authors:  Katherine C Kurnit; Ecaterina E Ileana Dumbrava; Beate Litzenburger; Yekaterina B Khotskaya; Amber M Johnson; Timothy A Yap; Jordi Rodon; Jia Zeng; Md Abu Shufean; Ann M Bailey; Nora S Sánchez; Vijaykumar Holla; John Mendelsohn; Kenna Mills Shaw; Elmer V Bernstam; Gordon B Mills; Funda Meric-Bernstam
Journal:  Clin Cancer Res       Date:  2018-02-02       Impact factor: 12.531

2.  Evaluation of Recipients of Positive and Negative Secondary Findings Evaluations in a Hybrid CLIA-Research Sequencing Pilot.

Authors:  Julie C Sapp; Jennifer J Johnston; Kate Driscoll; Alexis R Heidlebaugh; Ane Miren Sagardia; D Nadine Dogbe; Kendall L Umstead; Erin Turbitt; Ilias Alevizos; Jeffrey Baron; Carsten Bönnemann; Brian Brooks; Sandra Donkervoort; Youn Hee Jee; W Marston Linehan; Francis J McMahon; Joel Moss; James C Mullikin; Deborah Nielsen; Eileen Pelayo; Alan T Remaley; Richard Siegel; Helen Su; Carlos Zarate; Teri A Manolio; Barbara B Biesecker; Leslie G Biesecker
Journal:  Am J Hum Genet       Date:  2018-08-16       Impact factor: 11.025

3.  Research Participants' Preferences for Hypothetical Secondary Results from Genomic Research.

Authors:  Julia Wynn; Josue Martinez; Jimmy Duong; Codruta Chiuzan; Jo C Phelan; Abby Fyer; Robert L Klitzman; Paul S Appelbaum; Wendy K Chung
Journal:  J Genet Couns       Date:  2016-12-29       Impact factor: 2.537

Review 4.  Off-label drug use in oncology: a systematic review of literature.

Authors:  M M Saiyed; P S Ong; L Chew
Journal:  J Clin Pharm Ther       Date:  2017-02-05       Impact factor: 2.512

5.  Personalized Clinical Decision Making Through Implementation of a Molecular Tumor Board: A German Single-Center Experience.

Authors:  Rouven Hoefflin; Anna-Lena Geißler; Ralph Fritsch; Rainer Claus; Julius Wehrle; Patrick Metzger; Meike Reiser; Leman Mehmed; Lisa Fauth; Dieter Henrik Heiland; Thalia Erbes; Friedrich Stock; Agnes Csanadi; Cornelius Miething; Britta Weddeling; Frank Meiss; Dagmar von Bubnoff; Christine Dierks; Isabell Ge; Volker Brass; Steffen Heeg; Henning Schäfer; Martin Boeker; Justyna Rawluk; Elke Maria Botzenhart; Gian Kayser; Simone Hettmer; Hauke Busch; Christoph Peters; Martin Werner; Justus Duyster; Tilman Brummer; Melanie Boerries; Silke Lassmann; Nikolas von Bubnoff
Journal:  JCO Precis Oncol       Date:  2018-08-16

6.  Feasibility and utility of a panel testing for 114 cancer-associated genes in a clinical setting: A hospital-based study.

Authors:  Kuniko Sunami; Hitoshi Ichikawa; Takashi Kubo; Mamoru Kato; Yutaka Fujiwara; Akihiko Shimomura; Takafumi Koyama; Hiroki Kakishima; Mayuko Kitami; Hiromichi Matsushita; Eisaku Furukawa; Daichi Narushima; Momoko Nagai; Hirokazu Taniguchi; Noriko Motoi; Shigeki Sekine; Akiko Maeshima; Taisuke Mori; Reiko Watanabe; Masayuki Yoshida; Akihiko Yoshida; Hiroshi Yoshida; Kaishi Satomi; Aoi Sukeda; Taiki Hashimoto; Toshio Shimizu; Satoru Iwasa; Kan Yonemori; Ken Kato; Chigusa Morizane; Chitose Ogawa; Noriko Tanabe; Kokichi Sugano; Nobuyoshi Hiraoka; Kenji Tamura; Teruhiko Yoshida; Yasuhiro Fujiwara; Atsushi Ochiai; Noboru Yamamoto; Takashi Kohno
Journal:  Cancer Sci       Date:  2019-04-02       Impact factor: 6.716

7.  Molecular profiling of cancer patients enables personalized combination therapy: the I-PREDICT study.

Authors:  Jason K Sicklick; Shumei Kato; Ryosuke Okamura; Maria Schwaederle; Michael E Hahn; Casey B Williams; Pradip De; Amy Krie; David E Piccioni; Vincent A Miller; Jeffrey S Ross; Adam Benson; Jennifer Webster; Philip J Stephens; J Jack Lee; Paul T Fanta; Scott M Lippman; Brian Leyland-Jones; Razelle Kurzrock
Journal:  Nat Med       Date:  2019-04-22       Impact factor: 53.440

Review 8.  Recommendations to improve the clinical adoption of NGS-based cancer diagnostics in Singapore.

Authors:  David Shao-Peng Tan; Daniel Shao-Weng Tan; Iain Bee Huat Tan; Benedict Yan; Su Pin Choo; Wee Joo Chng; William Ying Khee Hwang
Journal:  Asia Pac J Clin Oncol       Date:  2020-04-16       Impact factor: 2.601

9.  Fast and accurate long-read alignment with Burrows-Wheeler transform.

Authors:  Heng Li; Richard Durbin
Journal:  Bioinformatics       Date:  2010-01-15       Impact factor: 6.937

Review 10.  Precision Oncology and the Universal Health Coverage System in Japan.

Authors:  Hiromichi Ebi; Hideaki Bando
Journal:  JCO Precis Oncol       Date:  2019-12-11
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  1 in total

1.  Ultra-sensitive molecular detection of gene fusions from RNA using ASPYRE.

Authors:  Eleanor R Gray; Justyna M Mordaka; Efthimia R Christoforou; Kristine von Bargen; Nicola D Potts; Christina Xyrafaki; Ana-Luisa Silva; Magdalena Stolarek-Januszkiewicz; Katarzyna Anton; Paulina K Powalowska; Simonetta Andreazza; Alessandro Tomassini; Rebecca N Palmer; Aishling Cooke; Robert J Osborne; Barnaby W Balmforth
Journal:  BMC Med Genomics       Date:  2022-10-12       Impact factor: 3.622

  1 in total

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