Literature DB >> 33798818

New discoveries expand possibilities for carboxysome engineering.

Julia S Borden1, David F Savage2.   

Abstract

Carboxysomes are CO2-fixing protein compartments present in all cyanobacteria and some proteobacteria. These structures are attractive candidates for carbon assimilation bioengineering because they concentrate carbon, allowing the fixation reaction to occur near its maximum rate, and because they self-assemble in diverse organisms with a set of standard biological parts. Recent discoveries have expanded our understanding of how the carboxysome assembles, distributes itself, and sustains its metabolism. These studies have already led to substantial advances in engineering the carboxysome and carbon concentrating mechanism into recombinant organisms, with an eye towards establishing the system in industrial microbes and plants. Future studies may also consider the potential of in vitro carboxysomes for both discovery and applied science.
Copyright © 2021 Elsevier Ltd. All rights reserved.

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Year:  2021        PMID: 33798818      PMCID: PMC8169590          DOI: 10.1016/j.mib.2021.03.002

Source DB:  PubMed          Journal:  Curr Opin Microbiol        ISSN: 1369-5274            Impact factor:   7.584


  61 in total

1.  Functional cyanobacterial beta-carboxysomes have an absolute requirement for both long and short forms of the CcmM protein.

Authors:  Benedict M Long; Loraine Tucker; Murray R Badger; G Dean Price
Journal:  Plant Physiol       Date:  2010-03-19       Impact factor: 8.340

2.  Structure and identification of a pterin dehydratase-like protein as a ribulose-bisphosphate carboxylase/oxygenase (RuBisCO) assembly factor in the α-carboxysome.

Authors:  Nicole M Wheatley; Christopher D Sundberg; Soheil D Gidaniyan; Duilio Cascio; Todd O Yeates
Journal:  J Biol Chem       Date:  2014-01-23       Impact factor: 5.157

3.  Dual Functions of a Rubisco Activase in Metabolic Repair and Recruitment to Carboxysomes.

Authors:  Mirkko Flecken; Huping Wang; Leonhard Popilka; F Ulrich Hartl; Andreas Bracher; Manajit Hayer-Hartl
Journal:  Cell       Date:  2020-09-25       Impact factor: 41.582

4.  Modularity of a carbon-fixing protein organelle.

Authors:  Walter Bonacci; Poh K Teng; Bruno Afonso; Henrike Niederholtmeyer; Patricia Grob; Pamela A Silver; David F Savage
Journal:  Proc Natl Acad Sci U S A       Date:  2011-12-19       Impact factor: 11.205

5.  Heterologous expression of the Halothiobacillus neapolitanus carboxysomal gene cluster in Corynebacterium glutamicum.

Authors:  Meike Baumgart; Isabel Huber; Iman Abdollahzadeh; Thomas Gensch; Julia Frunzke
Journal:  J Biotechnol       Date:  2017-03-27       Impact factor: 3.307

6.  Towards engineering carboxysomes into C3 plants.

Authors:  Maureen R Hanson; Myat T Lin; A Elizabete Carmo-Silva; Martin A J Parry
Journal:  Plant J       Date:  2016-06-20       Impact factor: 6.417

7.  A faster Rubisco with potential to increase photosynthesis in crops.

Authors:  Myat T Lin; Alessandro Occhialini; P John Andralojc; Martin A J Parry; Maureen R Hanson
Journal:  Nature       Date:  2014-09-17       Impact factor: 49.962

8.  The global mass and average rate of rubisco.

Authors:  Yinon M Bar-On; Ron Milo
Journal:  Proc Natl Acad Sci U S A       Date:  2019-02-19       Impact factor: 11.205

9.  Rubisco condensate formation by CcmM in β-carboxysome biogenesis.

Authors:  H Wang; X Yan; H Aigner; A Bracher; N D Nguyen; W Y Hee; B M Long; G D Price; F U Hartl; M Hayer-Hartl
Journal:  Nature       Date:  2019-01-23       Impact factor: 49.962

10.  Structural Characterization of a Newly Identified Component of α-Carboxysomes: The AAA+ Domain Protein CsoCbbQ.

Authors:  Markus Sutter; Evan W Roberts; Raul C Gonzalez; Cassandra Bates; Salma Dawoud; Kimberly Landry; Gordon C Cannon; Sabine Heinhorst; Cheryl A Kerfeld
Journal:  Sci Rep       Date:  2015-11-05       Impact factor: 4.379

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  6 in total

1.  Decoding the Absolute Stoichiometric Composition and Structural Plasticity of α-Carboxysomes.

Authors:  Yaqi Sun; Victoria M Harman; James R Johnson; Philip J Brownridge; Taiyu Chen; Gregory F Dykes; Yongjun Lin; Robert J Beynon; Lu-Ning Liu
Journal:  mBio       Date:  2022-03-28       Impact factor: 7.786

2.  Rubisco regulation in response to altered carbon status in the cyanobacterium Synechococcus elongatus PCC 7942.

Authors:  Amit K Singh; María Santos-Merino; Jonathan K Sakkos; Berkley J Walker; Daniel C Ducat
Journal:  Plant Physiol       Date:  2022-06-01       Impact factor: 8.005

Review 3.  Synthetic Biology Approaches for Improving Chemical Production in Cyanobacteria.

Authors:  Tanner R Treece; Jake N Gonzales; Joseph R Pressley; Shota Atsumi
Journal:  Front Bioeng Biotechnol       Date:  2022-03-11

4.  Ratiometric Sensing of Redox Environments Inside Individual Carboxysomes Trapped in Solution.

Authors:  William B Carpenter; Abhijit A Lavania; Julia S Borden; Luke M Oltrogge; Davis Perez; Peter D Dahlberg; David F Savage; W E Moerner
Journal:  J Phys Chem Lett       Date:  2022-05-13       Impact factor: 6.888

5.  Rubisco forms a lattice inside alpha-carboxysomes.

Authors:  Lauren Ann Metskas; Davi Ortega; Luke M Oltrogge; Cecilia Blikstad; Derik R Lovejoy; Thomas G Laughlin; David F Savage; Grant J Jensen
Journal:  Nat Commun       Date:  2022-08-18       Impact factor: 17.694

6.  Chemophoresis engine: A general mechanism of ATPase-driven cargo transport.

Authors:  Takeshi Sugawara; Kunihiko Kaneko
Journal:  PLoS Comput Biol       Date:  2022-07-25       Impact factor: 4.779

  6 in total

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