Literature DB >> 33752807

Research Techniques Made Simple: Use of Imaging Mass Cytometry for Dermatological Research and Clinical Applications.

Jesse Veenstra1, Peter Dimitrion2, Yi Yao1, Li Zhou3, David Ozog4, Qing-Sheng Mi5.   

Abstract

Traditional immunohistochemistry (IHC) is inherently limited by its ability to analyze only several markers within a histological tissue section at a given time, which hinders in-depth characterization and phenotyping of tissues. Imaging mass cytometry (IMC), which combines IHC using metal-labeled antibodies with laser ablation and detection using mass cytometry by time-of-flight, overcomes this limitation with the capability to simultaneously analyze up to 40 protein markers to generate high-dimensional images from a single tissue section. IMC analysis preserves tissue architecture and spatial cellular relationships that would otherwise be lost or significantly altered in applications requiring tissue dissociation, such as flow cytometry or single-cell RNA sequencing. Resulting high-dimensional histological images permit spatially conserved analysis to identify unique cell populations, cellular interactions and avoidances, and insight into activation and behavioral status based on tissue location. IMC can be performed on both frozen and formalin-fixed paraffin-embedded tissue, allowing for previously banked samples to be analyzed and correlated with known clinical outcomes. Expectedly, IMC will change the landscape of investigative pathology, particularly when used in coordination with multiomic platforms to combine transcriptomic and proteomic data at a single-cell resolution. Here, we aim to highlight the potential utility of IMC within dermatologic research and clinical applications.
Copyright © 2021 The Authors. Published by Elsevier Inc. All rights reserved.

Entities:  

Mesh:

Substances:

Year:  2021        PMID: 33752807      PMCID: PMC7995633          DOI: 10.1016/j.jid.2020.12.008

Source DB:  PubMed          Journal:  J Invest Dermatol        ISSN: 0022-202X            Impact factor:   8.551


  10 in total

1.  Flow Cytometry II: Mass and Imaging Cytometry.

Authors:  H Doan; G M Chinn; R R Jahan-Tigh
Journal:  J Invest Dermatol       Date:  2015-10-22       Impact factor: 8.551

2.  Research Techniques Made Simple: Experimental Methodology for Single-Cell Mass Cytometry.

Authors:  Tiago R Matos; Hongye Liu; Jerome Ritz
Journal:  J Invest Dermatol       Date:  2017-04       Impact factor: 8.551

3.  Highly multiplexed imaging of tumor tissues with subcellular resolution by mass cytometry.

Authors:  Charlotte Giesen; Hao A O Wang; Denis Schapiro; Nevena Zivanovic; Andrea Jacobs; Bodo Hattendorf; Peter J Schüffler; Daniel Grolimund; Joachim M Buhmann; Simone Brandt; Zsuzsanna Varga; Peter J Wild; Detlef Günther; Bernd Bodenmiller
Journal:  Nat Methods       Date:  2014-03-02       Impact factor: 28.547

Review 4.  Multiplexed Epitope-Based Tissue Imaging for Discovery and Healthcare Applications.

Authors:  Bernd Bodenmiller
Journal:  Cell Syst       Date:  2016-04-27       Impact factor: 10.304

5.  Highly multiplexed single-cell analysis of formalin-fixed, paraffin-embedded cancer tissue.

Authors:  Michael J Gerdes; Christopher J Sevinsky; Anup Sood; Sudeshna Adak; Musodiq O Bello; Alexander Bordwell; Ali Can; Alex Corwin; Sean Dinn; Robert J Filkins; Denise Hollman; Vidya Kamath; Sireesha Kaanumalle; Kevin Kenny; Melinda Larsen; Michael Lazare; Qing Li; Christina Lowes; Colin C McCulloch; Elizabeth McDonough; Michael C Montalto; Zhengyu Pang; Jens Rittscher; Alberto Santamaria-Pang; Brion D Sarachan; Maximilian L Seel; Antti Seppo; Kashan Shaikh; Yunxia Sui; Jingyu Zhang; Fiona Ginty
Journal:  Proc Natl Acad Sci U S A       Date:  2013-07-01       Impact factor: 11.205

6.  The single-cell pathology landscape of breast cancer.

Authors:  Hartland W Jackson; Jana R Fischer; Vito R T Zanotelli; H Raza Ali; Robert Mechera; Savas D Soysal; Holger Moch; Simone Muenst; Zsuzsanna Varga; Walter P Weber; Bernd Bodenmiller
Journal:  Nature       Date:  2020-01-20       Impact factor: 49.962

7.  Simultaneous epitope and transcriptome measurement in single cells.

Authors:  Marlon Stoeckius; Christoph Hafemeister; William Stephenson; Brian Houck-Loomis; Pratip K Chattopadhyay; Harold Swerdlow; Rahul Satija; Peter Smibert
Journal:  Nat Methods       Date:  2017-07-31       Impact factor: 28.547

8.  histoCAT: analysis of cell phenotypes and interactions in multiplex image cytometry data.

Authors:  Denis Schapiro; Hartland W Jackson; Swetha Raghuraman; Jana R Fischer; Vito R T Zanotelli; Daniel Schulz; Charlotte Giesen; Raúl Catena; Zsuzsanna Varga; Bernd Bodenmiller
Journal:  Nat Methods       Date:  2017-08-07       Impact factor: 28.547

9.  Multimodal Analysis of Composition and Spatial Architecture in Human Squamous Cell Carcinoma.

Authors:  Andrew L Ji; Adam J Rubin; Kim Thrane; Sizun Jiang; David L Reynolds; Robin M Meyers; Margaret G Guo; Benson M George; Annelie Mollbrink; Joseph Bergenstråhle; Ludvig Larsson; Yunhao Bai; Bokai Zhu; Aparna Bhaduri; Jordan M Meyers; Xavier Rovira-Clavé; S Tyler Hollmig; Sumaira Z Aasi; Garry P Nolan; Joakim Lundeberg; Paul A Khavari
Journal:  Cell       Date:  2020-09-17       Impact factor: 41.582

10.  Contribution of plasma cells and B cells to hidradenitis suppurativa pathogenesis.

Authors:  Johann E Gudjonsson; Lam C Tsoi; Feiyang Ma; Allison C Billi; K R van Straalen; A R J V Vossen; H H van der Zee; Paul W Harms; Rachael Wasikowski; Christine M Yee; Syed M Rizvi; Xianying Xing; Enze Xing; Olesya Plazyo; Chang Zeng; Matthew T Patrick; Margaret M Lowe; Richard E Burney; Jeffrey H Kozlow; Jill R Cherry-Bukowiec; Yanyun Jiang; Joseph Kirma; Stephan Weidinger; Kelly C Cushing; Michael D Rosenblum; Celine Berthier; Amanda S MacLeod; John J Voorhees; Fei Wen; J Michelle Kahlenberg; Emanual Maverakis; Robert L Modlin; Errol P Prens
Journal:  JCI Insight       Date:  2020-10-02
  10 in total
  2 in total

Review 1.  Applications of single-cell sequencing in cancer research: progress and perspectives.

Authors:  Yalan Lei; Rong Tang; Jin Xu; Wei Wang; Bo Zhang; Jiang Liu; Xianjun Yu; Si Shi
Journal:  J Hematol Oncol       Date:  2021-06-09       Impact factor: 17.388

Review 2.  The Role of Pathology-Based Methods in Qualitative and Quantitative Approaches to Cancer Immunotherapy.

Authors:  Olga Kuczkiewicz-Siemion; Kamil Sokół; Beata Puton; Aneta Borkowska; Anna Szumera-Ciećkiewicz
Journal:  Cancers (Basel)       Date:  2022-08-08       Impact factor: 6.575

  2 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.