Literature DB >> 33750972

Cloning and functional characterization of seed-specific LEC1A promoter from peanut (Arachis hypogaea L.).

Guiying Tang1, Pingli Xu1, Pengxiang Li1,2, Jieqiong Zhu1,2, Guangxia Chen3, Lei Shan1,2, Shubo Wan1,2.   

Abstract

LEAFY COTYLEDON1 (LEC1) is a HAP3 subunit of CCAAT-binding transcription factor, which controls several aspects of embryo and postembryo development, including embryo morphogenesis, storage reserve accumulation and skotomorphogenesis. Herein, using the method of chromosomal walking, a 2707bp upstream sequence from the ATG initiation codon site of AhLEC1A which is a homolog of Arabidopsis LEC1 was isolated in peanut. Its transcriptional start site confirmed by 5' RACE was located at 82 nt from 5' upstream of ATG. The bioinformatics analysis revealed that there existed many tissue-specific elements and light responsive motifs in its promoter. To identify the functional region of the AhLEC1A promoter, seven plant expression vectors expressing the GUS (β-glucuronidase) gene, driven by 5' terminal series deleted fragments of AhLEC1A promoter, were constructed and transformed into Arabidopsis. Results of GUS histochemical staining showed that the regulatory region containing 82bp of 5' UTR and 2228bp promoter could facilitate GUS to express preferentially in the embryos at different development periods of Arabidopsis. Taken together, it was inferred that the expression of AhLEC1A during seed development of peanut might be controlled positively by several seed-specific regulatory elements, as well as negatively by some other regulatory elements inhibiting its expression in other organs. Moreover, the GUS expression pattern of transgenic seedlings in darkness and in light was relevant to the light-responsive elements scattered in AhLEC1A promoter segment, implying that these light-responsive elements harbored in the AhLEC1A promoter regulate skotomorphogenesis of peanut seeds, and AhLEC1A expression was inhibited after the germinated seedlings were transferred from darkness to light.

Entities:  

Year:  2021        PMID: 33750972      PMCID: PMC7984638          DOI: 10.1371/journal.pone.0242949

Source DB:  PubMed          Journal:  PLoS One        ISSN: 1932-6203            Impact factor:   3.240


  65 in total

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Authors:  Julie M Pelletier; Raymond W Kwong; Soomin Park; Brandon H Le; Russell Baden; Alexandro Cagliari; Meryl Hashimoto; Matthew D Munoz; Robert L Fischer; Robert B Goldberg; John J Harada
Journal:  Proc Natl Acad Sci U S A       Date:  2017-07-24       Impact factor: 11.205

2.  Involvement of ethylene in stress-induced expression of the TLC1.1 retrotransposon from Lycopersicon chilense Dun.

Authors:  Gerardo Tapia; Isabel Verdugo; Mónica Yañez; Iván Ahumada; Cristina Theoduloz; Cecilia Cordero; Fernando Poblete; Enrique González; Simón Ruiz-Lara
Journal:  Plant Physiol       Date:  2005-07-22       Impact factor: 8.340

3.  Combinatorial interactions of the LEC1 transcription factor specify diverse developmental programs during soybean seed development.

Authors:  Leonardo Jo; Julie M Pelletier; Ssu-Wei Hsu; Russell Baden; Robert B Goldberg; John J Harada
Journal:  Proc Natl Acad Sci U S A       Date:  2019-12-31       Impact factor: 11.205

4.  Functional analysis of homologous and heterologous promoters in strawberry fruits using transient expression.

Authors:  Fernanda Agius; Iraida Amaya; Miguel A Botella; Victoriano Valpuesta
Journal:  J Exp Bot       Date:  2004-11-08       Impact factor: 6.992

5.  Dof1 and Dof2 transcription factors are associated with expression of multiple genes involved in carbon metabolism in maize.

Authors:  S Yanagisawa
Journal:  Plant J       Date:  2000-02       Impact factor: 6.417

6.  Identification of cis-elements for ethylene and circadian regulation of the Solanum melongena gene encoding cysteine proteinase.

Authors:  Reetika Rawat; Zeng-Fu Xu; Kwok-Ming Yao; Mee-Len Chye
Journal:  Plant Mol Biol       Date:  2005-03       Impact factor: 4.076

7.  A rice WRKY gene encodes a transcriptional repressor of the gibberellin signaling pathway in aleurone cells.

Authors:  Zhong-Lin Zhang; Zhen Xie; Xiaolu Zou; Jose Casaretto; Tuan-Hua David Ho; Qingxi J Shen
Journal:  Plant Physiol       Date:  2004-03-26       Impact factor: 8.340

8.  GUS fusions: beta-glucuronidase as a sensitive and versatile gene fusion marker in higher plants.

Authors:  R A Jefferson; T A Kavanagh; M W Bevan
Journal:  EMBO J       Date:  1987-12-20       Impact factor: 11.598

9.  Interactions and CCAAT-binding of Arabidopsis thaliana NF-Y subunits.

Authors:  Valentina Calvenzani; Barbara Testoni; Giuliana Gusmaroli; Mariangela Lorenzo; Nerina Gnesutta; Katia Petroni; Roberto Mantovani; Chiara Tonelli
Journal:  PLoS One       Date:  2012-08-17       Impact factor: 3.240

10.  Comparison of Arachis monticola with Diploid and Cultivated Tetraploid Genomes Reveals Asymmetric Subgenome Evolution and Improvement of Peanut.

Authors:  Dongmei Yin; Changmian Ji; Qingxin Song; Wanke Zhang; Xingguo Zhang; Kunkun Zhao; Charles Y Chen; Chuantang Wang; Guohao He; Zhe Liang; Xingli Ma; Zhongfeng Li; Yueyi Tang; Yuejun Wang; Ke Li; Longlong Ning; Hui Zhang; Kai Zhao; Xuming Li; Haiyan Yu; Yan Lei; Mingcheng Wang; Liming Ma; Hongkun Zheng; Yijing Zhang; Jinsong Zhang; Wei Hu; Z Jeffrey Chen
Journal:  Adv Sci (Weinh)       Date:  2019-11-28       Impact factor: 16.806

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  3 in total

Review 1.  Harnessing tissue-specific genome editing in plants through CRISPR/Cas system: current state and future prospects.

Authors:  Dhanawantari L Singha; Debajit Das; Yogita N Sarki; Naimisha Chowdhury; Monica Sharma; Jitendra Maharana; Channakeshavaiah Chikkaputtaiah
Journal:  Planta       Date:  2021-12-28       Impact factor: 4.116

2.  CRISPR/Cas9 Based Site-Specific Modification of FAD2 cis-Regulatory Motifs in Peanut (Arachis hypogaea L).

Authors:  Anjanasree K Neelakandan; David A Wright; Sy M Traore; Xiangyu Chen; Martin H Spalding; Guohao He
Journal:  Front Genet       Date:  2022-04-27       Impact factor: 4.772

3.  Cloning and Functional Characterization of a Pericarp Abundant Expression Promoter (AhGLP17-1P) From Peanut (Arachis hypogaea L.).

Authors:  Yasir Sharif; Hua Chen; Ye Deng; Niaz Ali; Shahid Ali Khan; Chong Zhang; Wenping Xie; Kun Chen; Tiecheng Cai; Qiang Yang; Yuhui Zhuang; Ali Raza; Weijian Zhuang
Journal:  Front Genet       Date:  2022-01-20       Impact factor: 4.599

  3 in total

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