Literature DB >> 3375061

T7 DNA polymerase in automated dideoxy sequencing.

T Kristensen1, H Voss, C Schwager, J Stegemann, B Sproat, W Ansorge.   

Abstract

T7 DNA polymerase with chemically inactivated 3'-5' exo-nuclease activity, as well as unmodified T7 DNA polymerase, were used for sequencing by the dideoxy method in an automated system with fluorescence labelled primer and on-line detection of laser-excited reaction products. An analysis of signal intensity variations in the C track revealed that low C signals were usually preceded by a T in the sequence. This effect was modified by surrounding nucleotides. Signal intensities were more uniform with T7 polymerase than with the Klenow fragment of DNA polymerase I. Some sequences ambiguous with the Klenow enzyme could easily be evaluated with the T7 enzyme. One sequence could only be read by the unmodified T7 polymerase, while both the Klenow fragment and the chemically modified T7 enzyme gave uninterpretable data.

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Year:  1988        PMID: 3375061      PMCID: PMC336507          DOI: 10.1093/nar/16.8.3487

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  7 in total

1.  Selective oxidation of the exonuclease domain of bacteriophage T7 DNA polymerase.

Authors:  S Tabor; C C Richardson
Journal:  J Biol Chem       Date:  1987-11-15       Impact factor: 5.157

2.  Automated DNA sequencing: ultrasensitive detection of fluorescent bands during electrophoresis.

Authors:  W Ansorge; B Sproat; J Stegemann; C Schwager; M Zenke
Journal:  Nucleic Acids Res       Date:  1987-06-11       Impact factor: 16.971

3.  A simple and rapid preparation of M13 sequencing templates for manual and automated dideoxy sequencing.

Authors:  T Kristensen; H Voss; W Ansorge
Journal:  Nucleic Acids Res       Date:  1987-07-24       Impact factor: 16.971

4.  Fluorescence detection in automated DNA sequence analysis.

Authors:  L M Smith; J Z Sanders; R J Kaiser; P Hughes; C Dodd; C R Connell; C Heiner; S B Kent; L E Hood
Journal:  Nature       Date:  1986 Jun 12-18       Impact factor: 49.962

5.  A non-radioactive automated method for DNA sequence determination.

Authors:  W Ansorge; B S Sproat; J Stegemann; C Schwager
Journal:  J Biochem Biophys Methods       Date:  1986-12

6.  Structure of large fragment of Escherichia coli DNA polymerase I complexed with dTMP.

Authors:  D L Ollis; P Brick; R Hamlin; N G Xuong; T A Steitz
Journal:  Nature       Date:  1985 Feb 28-Mar 6       Impact factor: 49.962

7.  DNA sequence analysis with a modified bacteriophage T7 DNA polymerase.

Authors:  S Tabor; C C Richardson
Journal:  Proc Natl Acad Sci U S A       Date:  1987-07       Impact factor: 11.205

  7 in total
  15 in total

1.  Direct solid phase sequencing of genomic and plasmid DNA using magnetic beads as solid support.

Authors:  T Hultman; S Ståhl; E Hornes; M Uhlén
Journal:  Nucleic Acids Res       Date:  1989-07-11       Impact factor: 16.971

2.  Escherichia coli K-12 and B contain functional bacteriophage P2 ogr genes.

Authors:  A Slettan; K Gebhardt; E Kristiansen; N K Birkeland; B H Lindqvist
Journal:  J Bacteriol       Date:  1992-06       Impact factor: 3.490

3.  Cloning of a growth arrest-specific and transforming growth factor beta-regulated gene, TI 1, from an epithelial cell line.

Authors:  B Kallin; R de Martin; T Etzold; V Sorrentino; L Philipson
Journal:  Mol Cell Biol       Date:  1991-10       Impact factor: 4.272

4.  Cloning and nucleotide sequence of the DNA gyrase gyrA gene from the fish pathogen Aeromonas salmonicida.

Authors:  H Oppegaard; H Sørum
Journal:  Antimicrob Agents Chemother       Date:  1996-05       Impact factor: 5.191

5.  Direct genomic fluorescent on-line sequencing and analysis using in vitro amplification of DNA.

Authors:  H Voss; C Schwager; U Wirkner; B Sproat; J Zimmermann; A Rosenthal; H Erfle; J Stegemann; W Ansorge
Journal:  Nucleic Acids Res       Date:  1989-04-11       Impact factor: 16.971

6.  gyrA mutations in quinolone-resistant isolates of the fish pathogen Aeromonas salmonicida.

Authors:  H Oppegaard; H Sørum
Journal:  Antimicrob Agents Chemother       Date:  1994-10       Impact factor: 5.191

7.  Recombinant Expression of a Putative Amidase Cloned from the Genome of Listeria monocytogenes that Lyses the Bacterium and its Monolayer in Conjunction with a Protease.

Authors:  Mustafa Simmons; Cesar A Morales; Brian B Oakley; Bruce S Seal
Journal:  Probiotics Antimicrob Proteins       Date:  2012-03       Impact factor: 4.609

8.  Identification of a frequent pseudodeficiency mutation in the fumarylacetoacetase gene, with implications for diagnosis of tyrosinemia type I.

Authors:  H Rootwelt; E Brodtkorb; E A Kvittingen
Journal:  Am J Hum Genet       Date:  1994-12       Impact factor: 11.025

9.  Assembly-defective point mutants of the human immunodeficiency virus type 1 Gag precursor phenotypically expressed in recombinant baculovirus-infected cells.

Authors:  S S Hong; P Boulanger
Journal:  J Virol       Date:  1993-05       Impact factor: 5.103

10.  Novel splice, missense, and nonsense mutations in the fumarylacetoacetase gene causing tyrosinemia type 1.

Authors:  H Rootwelt; R Berger; G Gray; D A Kelly; T Coşkun; E A Kvittingen
Journal:  Am J Hum Genet       Date:  1994-10       Impact factor: 11.025

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