Literature DB >> 33712696

Water orientation and dynamics in the closed and open influenza B virus M2 proton channels.

Martin D Gelenter1, Venkata S Mandala1, Michiel J M Niesen1, Dina A Sharon1, Aurelio J Dregni1, Adam P Willard1, Mei Hong2.   

Abstract

The influenza B M2 protein forms a water-filled tetrameric channel to conduct protons across the lipid membrane. To understand how channel water mediates proton transport, we have investigated the water orientation and dynamics using solid-state NMR spectroscopy and molecular dynamics (MD) simulations. 13C-detected water 1H NMR relaxation times indicate that water has faster rotational motion in the low-pH open channel than in the high-pH closed channel. Despite this faster dynamics, the open-channel water shows higher orientational order, as manifested by larger motionally-averaged 1H chemical shift anisotropies. MD simulations indicate that this order is induced by the cationic proton-selective histidine at low pH. Furthermore, the water network has fewer hydrogen-bonding bottlenecks in the open state than in the closed state. Thus, faster dynamics and higher orientational order of water molecules in the open channel establish the water network structure that is necessary for proton hopping.

Entities:  

Year:  2021        PMID: 33712696      PMCID: PMC7955094          DOI: 10.1038/s42003-021-01847-2

Source DB:  PubMed          Journal:  Commun Biol        ISSN: 2399-3642


  66 in total

1.  Chemistry of ion coordination and hydration revealed by a K+ channel-Fab complex at 2.0 A resolution.

Authors:  Y Zhou; J H Morais-Cabral; A Kaufman; R MacKinnon
Journal:  Nature       Date:  2001-11-01       Impact factor: 49.962

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Authors:  Christoph Dellago; Mor M Naor; Gerhard Hummer
Journal:  Phys Rev Lett       Date:  2003-03-14       Impact factor: 9.161

3.  SPINEVOLUTION: a powerful tool for the simulation of solid and liquid state NMR experiments.

Authors:  Mikhail Veshtort; Robert G Griffin
Journal:  J Magn Reson       Date:  2005-12-07       Impact factor: 2.229

4.  CHARMM-GUI: a web-based graphical user interface for CHARMM.

Authors:  Sunhwan Jo; Taehoon Kim; Vidyashankara G Iyer; Wonpil Im
Journal:  J Comput Chem       Date:  2008-08       Impact factor: 3.376

5.  Transport-Relevant Protein Conformational Dynamics and Water Dynamics on Multiple Time Scales in an Archetypal Proton Channel: Insights from Solid-State NMR.

Authors:  Venkata S Mandala; Martin D Gelenter; Mei Hong
Journal:  J Am Chem Soc       Date:  2018-01-22       Impact factor: 15.419

6.  Methylammonium lead chloride: A sensitive sample for an accurate NMR thermometer.

Authors:  Guy M Bernard; Atul Goyal; Mark Miskolzie; Ryan McKay; Qichao Wu; Roderick E Wasylishen; Vladimir K Michaelis
Journal:  J Magn Reson       Date:  2017-08-08       Impact factor: 2.229

7.  Microsecond Protein Dynamics from Combined Bloch-McConnell and Near-Rotary-Resonance R1p Relaxation-Dispersion MAS NMR.

Authors:  Dominique Marion; Diego F Gauto; Isabel Ayala; Karine Giandoreggio-Barranco; Paul Schanda
Journal:  Chemphyschem       Date:  2018-12-20       Impact factor: 3.102

8.  Conformational changes of an ion channel detected through water-protein interactions using solid-state NMR spectroscopy.

Authors:  Wenbin Luo; Mei Hong
Journal:  J Am Chem Soc       Date:  2010-02-24       Impact factor: 15.419

9.  Coupling amplification in 2D MAS NMR and its application to torsion angle determination in peptides.

Authors:  M Hong; J D Gross; C M Rienstra; R G Griffin; K K Kumashiro; K Schmidt-Rohr
Journal:  J Magn Reson       Date:  1997-11       Impact factor: 2.229

10.  Subangstrom resolution X-ray structure details aquaporin-water interactions.

Authors:  Urszula Kosinska Eriksson; Gerhard Fischer; Rosmarie Friemann; Giray Enkavi; Emad Tajkhorshid; Richard Neutze
Journal:  Science       Date:  2013-06-14       Impact factor: 47.728

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  1 in total

1.  Molecular interaction and partitioning in α-keratin using 1H NMR spin-lattice (T1) relaxation times.

Authors:  Susannah Molisso; Daryl R Williams; Oscar Ces; Lucy J Rowlands; Jennifer M Marsh; Robert V Law
Journal:  J R Soc Interface       Date:  2021-12-08       Impact factor: 4.118

  1 in total

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