Literature DB >> 33707488

Prediction of tau accumulation in prodromal Alzheimer's disease using an ensemble machine learning approach.

Jaeho Kim1,2,3,4, Yuhyun Park2,5, Seongbeom Park2, Hyemin Jang2,3,4, Hee Jin Kim2,3,4, Duk L Na2,3,4,6,7, Hyejoo Lee8,9,10, Sang Won Seo11,12,13,14,15.   

Abstract

We developed machine learning (ML) algorithms to predict abnormal tau accumulation among patients with prodromal AD. We recruited 64 patients with prodromal AD using the Alzheimer's Disease Neuroimaging Initiative (ADNI) dataset. Supervised ML approaches based on the random forest (RF) and a gradient boosting machine (GBM) were used. The GBM resulted in an AUC of 0.61 (95% confidence interval [CI] 0.579-0.647) with clinical data (age, sex, years of education) and a higher AUC of 0.817 (95% CI 0.804-0.830) with clinical and neuropsychological data. The highest AUC was 0.86 (95% CI 0.839-0.885) achieved with additional information such as cortical thickness in clinical data and neuropsychological results. Through the analysis of the impact order of the variables in each ML classifier, cortical thickness of the parietal lobe and occipital lobe and neuropsychological tests of memory domain were found to be more important features for each classifier. Our ML algorithms predicting tau burden may provide important information for the recruitment of participants in potential clinical trials of tau targeting therapies.

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Year:  2021        PMID: 33707488      PMCID: PMC7970986          DOI: 10.1038/s41598-021-85165-x

Source DB:  PubMed          Journal:  Sci Rep        ISSN: 2045-2322            Impact factor:   4.379


  23 in total

1.  Cognitive Efficiency in Alzheimer's Disease is Associated with Increased Occipital Connectivity.

Authors:  Matteo De Marco; Davide Duzzi; Francesca Meneghello; Annalena Venneri
Journal:  J Alzheimers Dis       Date:  2017       Impact factor: 4.472

2.  Index for rating diagnostic tests.

Authors:  W J YOUDEN
Journal:  Cancer       Date:  1950-01       Impact factor: 6.860

3.  Automatic 3D intersubject registration of MR volumetric data in standardized Talairach space.

Authors:  D L Collins; P Neelin; T M Peters; A C Evans
Journal:  J Comput Assist Tomogr       Date:  1994 Mar-Apr       Impact factor: 1.826

4.  Discriminative Accuracy of [18F]flortaucipir Positron Emission Tomography for Alzheimer Disease vs Other Neurodegenerative Disorders.

Authors:  Rik Ossenkoppele; Gil D Rabinovici; Ruben Smith; Hanna Cho; Michael Schöll; Olof Strandberg; Sebastian Palmqvist; Niklas Mattsson; Shorena Janelidze; Alexander Santillo; Tomas Ohlsson; Jonas Jögi; Richard Tsai; Renaud La Joie; Joel Kramer; Adam L Boxer; Maria L Gorno-Tempini; Bruce L Miller; Jae Y Choi; Young H Ryu; Chul H Lyoo; Oskar Hansson
Journal:  JAMA       Date:  2018-09-18       Impact factor: 56.272

5.  Fully-automated approach to hippocampus segmentation using a graph-cuts algorithm combined with atlas-based segmentation and morphological opening.

Authors:  Kichang Kwak; Uicheul Yoon; Dong-Kyun Lee; Geon Ha Kim; Sang Won Seo; Duk L Na; Hack-Joon Shim; Jong-Min Lee
Journal:  Magn Reson Imaging       Date:  2013-05-16       Impact factor: 2.546

6.  PET Imaging of Tau Deposition in the Aging Human Brain.

Authors:  Michael Schöll; Samuel N Lockhart; Daniel R Schonhaut; James P O'Neil; Mustafa Janabi; Rik Ossenkoppele; Suzanne L Baker; Jacob W Vogel; Jamie Faria; Henry D Schwimmer; Gil D Rabinovici; William J Jagust
Journal:  Neuron       Date:  2016-03-02       Impact factor: 17.173

7.  Amyloid imaging in mild cognitive impairment subtypes.

Authors:  David A Wolk; Julie C Price; Judy A Saxton; Beth E Snitz; Jeffrey A James; Oscar L Lopez; Howard J Aizenstein; Ann D Cohen; Lisa A Weissfeld; Chester A Mathis; William E Klunk; Steven T De-Kosky; Steven T DeKoskym
Journal:  Ann Neurol       Date:  2009-05       Impact factor: 10.422

Review 8.  Fast robust automated brain extraction.

Authors:  Stephen M Smith
Journal:  Hum Brain Mapp       Date:  2002-11       Impact factor: 5.038

9.  Associations between tau, Aβ, and cortical thickness with cognition in Alzheimer disease.

Authors:  Rik Ossenkoppele; Ruben Smith; Tomas Ohlsson; Olof Strandberg; Niklas Mattsson; Philip S Insel; Sebastian Palmqvist; Oskar Hansson
Journal:  Neurology       Date:  2019-01-09       Impact factor: 9.910

10.  Prediction of fast decline in amyloid positive mild cognitive impairment patients using multimodal biomarkers.

Authors:  Hyemin Jang; Jongyun Park; Sookyoung Woo; Seonwoo Kim; Hee Jin Kim; Duk L Na; Samuel N Lockhart; Yeshin Kim; Ko Woon Kim; Soo Hyun Cho; Seung Joo Kim; Joon-Kyung Seong; Sang Won Seo
Journal:  Neuroimage Clin       Date:  2019-07-19       Impact factor: 4.881

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  1 in total

Review 1.  Potential Applications of Artificial Intelligence in Clinical Trials for Alzheimer's Disease.

Authors:  Younghoon Seo; Hyemin Jang; Hyejoo Lee
Journal:  Life (Basel)       Date:  2022-02-12
  1 in total

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