Literature DB >> 33705406

A facile and comprehensive algorithm for electrical response identification in mouse retinal ganglion cells.

Wanying Li1,2, Shan Qin3, Yijie Lu4, Hao Wang1, Zhen Xu1, Tianzhun Wu1.   

Abstract

Retinal prostheses can restore the basic visual function of patients with retinal degeneration, which relies on effective electrical stimulation to evoke the physiological activities of retinal ganglion cells (RGCs). Current electrical stimulation strategies have defects such as unstable effects and insufficient stimulation positions, therefore, it is crucial to determine the optimal pulse parameters for precise and safe electrical stimulation. Biphasic voltages (cathode-first) with a pulse width of 25 ms and different amplitudes were used to ex vivo stimulate RGCs of three wild-type (WT) mice using a commercial microelectrode array (MEA) recording system. An algorithm is developed to automatically realize both spike-sorting and electrical response identification for the spike signals recorded. Measured from three WT mouse retinas, the total numbers of RGC units and responsive RGC units were 1193 and 151, respectively. In addition, the optimal pulse amplitude range for electrical stimulation was determined to be 0.43 V-1.3 V. The processing results of the automatic algorithm we proposed shows high consistency with those using traditional manual processing. We anticipate the new algorithm can not only speed up the elaborate electrophysiological data processing, but also optimize pulse parameters for the electrical stimulation strategy of neural prostheses.

Entities:  

Year:  2021        PMID: 33705406      PMCID: PMC7951861          DOI: 10.1371/journal.pone.0246547

Source DB:  PubMed          Journal:  PLoS One        ISSN: 1932-6203            Impact factor:   3.240


  35 in total

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Authors:  Vahid Shalchyan; Winnie Jensen; Dario Farina
Journal:  IEEE Trans Biomed Eng       Date:  2012-07-03       Impact factor: 4.538

2.  An Efficient Hardware Architecture for Template Matching-Based Spike Sorting.

Authors:  Daniel Valencia; Amirhossein Alimohammad
Journal:  IEEE Trans Biomed Circuits Syst       Date:  2019-03-27       Impact factor: 3.833

3.  A stationary wavelet transform and a time-frequency based spike detection algorithm for extracellular recorded data.

Authors:  Florian Lieb; Hans-Georg Stark; Christiane Thielemann
Journal:  J Neural Eng       Date:  2017-03-08       Impact factor: 5.379

Review 4.  Global estimates of visual impairment: 2010.

Authors:  Donatella Pascolini; Silvio Paolo Mariotti
Journal:  Br J Ophthalmol       Date:  2011-12-01       Impact factor: 4.638

Review 5.  Restoring Vision to the Blind with Chemical Photoswitches.

Authors:  Ivan Tochitsky; Michael A Kienzler; Ehud Isacoff; Richard H Kramer
Journal:  Chem Rev       Date:  2018-06-06       Impact factor: 60.622

6.  Retinal ganglion cell responses to voltage and current stimulation in wild-type and rd1 mouse retinas.

Authors:  Yong Sook Goo; Jang Hee Ye; Seokyoung Lee; Yoonkey Nam; Sang Baek Ryu; Kyung Hwan Kim
Journal:  J Neural Eng       Date:  2011-05-18       Impact factor: 5.379

7.  Automated detection of premature delivery using empirical mode and wavelet packet decomposition techniques with uterine electromyogram signals.

Authors:  U Rajendra Acharya; Vidya K Sudarshan; Soon Qing Rong; Zechariah Tan; Choo Min Lim; Joel Ew Koh; Sujatha Nayak; Sulatha V Bhandary
Journal:  Comput Biol Med       Date:  2017-04-18       Impact factor: 4.589

Review 8.  The Argus(®) II Retinal Prosthesis System.

Authors:  Yvonne Hsu-Lin Luo; Lyndon da Cruz
Journal:  Prog Retin Eye Res       Date:  2015-09-25       Impact factor: 21.198

9.  Photovoltaic Retinal Prosthesis with High Pixel Density.

Authors:  Keith Mathieson; James Loudin; Georges Goetz; Philip Huie; Lele Wang; Theodore I Kamins; Ludwig Galambos; Richard Smith; James S Harris; Alexander Sher; Daniel Palanker
Journal:  Nat Photonics       Date:  2012-05-13       Impact factor: 38.771

10.  SpikeInterface, a unified framework for spike sorting.

Authors:  Alessio P Buccino; Cole L Hurwitz; Samuel Garcia; Jeremy Magland; Joshua H Siegle; Roger Hurwitz; Matthias H Hennig
Journal:  Elife       Date:  2020-11-10       Impact factor: 8.140

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  1 in total

Review 1.  From End to End: Gaining, Sorting, and Employing High-Density Neural Single Unit Recordings.

Authors:  Réka Barbara Bod; János Rokai; Domokos Meszéna; Richárd Fiáth; István Ulbert; Gergely Márton
Journal:  Front Neuroinform       Date:  2022-06-13       Impact factor: 3.739

  1 in total

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