Literature DB >> 33664150

Complete Genome Sequence of Peptacetobacter (Clostridium) hiranonis Strain DGF055142, Isolated from Dog Feces from Flagstaff, Arizona, USA, 2019.

Nathan E Stone1, Amalee E Nunnally1, Chandler C Roe1, Heidie M Hornstra1, David M Wagner1,2, Jason W Sahl3,2.   

Abstract

A single-chromosome closed genome of Peptacetobacter (Clostridium) hiranonis strain DGF055142 was generated using Illumina MiSeq short reads paired with Oxford Nanopore MinION long reads. This isolate was obtained from a canine in Flagstaff, Arizona, in 2019. Peptacetobacter (C.) hiranonis was hypothesized to contribute to canine Clostridium difficile infection resistance.
Copyright © 2021 Stone et al.

Entities:  

Year:  2021        PMID： 33664150      PMCID： PMC7936630          DOI： 10.1128/MRA.00067-21

Source DB:  PubMed          Journal:  Microbiol Resour Announc        ISSN： 2576-098X


  18 in total

1.  A one-step microbial DNA extraction method using "Chelex 100" suitable for gene amplification.

Authors:  X de Lamballerie; C Zandotti; C Vignoli; C Bollet; P de Micco
Journal:  Res Microbiol       Date:  1992-10       Impact factor: 3.992

Review 2.  Impact of microbial derived secondary bile acids on colonization resistance against Clostridium difficile in the gastrointestinal tract.

Authors:  Jenessa A Winston; Casey M Theriot
Journal:  Anaerobe       Date:  2016-05-07       Impact factor: 3.331

3.  Domestic canines do not display evidence of gut microbial dysbiosis in the presence of Clostridioides (Clostridium) difficile, despite cellular susceptibility to its toxins.

Authors:  Nathan E Stone; Amalee E Nunnally; Victor Jimenez; Emily K Cope; Jason W Sahl; Krystal Sheridan; Heidie M Hornstra; Jacob Vinocur; Erik W Settles; Kyle C Headley; Charles H D Williamson; Jai Ram Rideout; Evan Bolyen; J Gregory Caporaso; Joel Terriquez; Fernando P Monroy; Joseph D Busch; Paul Keim; David M Wagner
Journal:  Anaerobe       Date:  2019-04-01       Impact factor: 3.331

4.  Clostridium hiranonis sp. nov., a human intestinal bacterium with bile acid 7alpha-dehydroxylating activity.

Authors:  M Kitahara; F Takamine; T Imamura; Y Benno
Journal:  Int J Syst Evol Microbiol       Date:  2001-01       Impact factor: 2.747

5.  PCR detection method of Clostridium scindens and C. hiranonis in human fecal samples.

Authors:  M Kitahara; M Sakamoto; Y Benno
Journal:  Microbiol Immunol       Date:  2001       Impact factor: 1.955

6.  Strain-Dependent Inhibition of Clostridioides difficile by Commensal Clostridia Carrying the Bile Acid-Inducible (bai) Operon.

Authors:  A D Reed; M A Nethery; A Stewart; R Barrangou; C M Theriot
Journal:  J Bacteriol       Date:  2020-05-11       Impact factor: 3.490

7.  Pilon: an integrated tool for comprehensive microbial variant detection and genome assembly improvement.

Authors:  Bruce J Walker; Thomas Abeel; Terrance Shea; Margaret Priest; Amr Abouelliel; Sharadha Sakthikumar; Christina A Cuomo; Qiandong Zeng; Jennifer Wortman; Sarah K Young; Ashlee M Earl
Journal:  PLoS One       Date:  2014-11-19       Impact factor: 3.240

8.  Burkholderia pseudomallei, the causative agent of melioidosis, is rare but ecologically established and widely dispersed in the environment in Puerto Rico.

Authors:  Carina M Hall; Sierra Jaramillo; Rebecca Jimenez; Nathan E Stone; Heather Centner; Joseph D Busch; Nicole Bratsch; Chandler C Roe; Jay E Gee; Alex R Hoffmaster; Sarai Rivera-Garcia; Fred Soltero; Kyle Ryff; Janice Perez-Padilla; Paul Keim; Jason W Sahl; David M Wagner
Journal:  PLoS Negl Trop Dis       Date:  2019-09-05

9.  The fecal microbiome in dogs with acute diarrhea and idiopathic inflammatory bowel disease.

Authors:  Jan S Suchodolski; Melissa E Markel; Jose F Garcia-Mazcorro; Stefan Unterer; Romy M Heilmann; Scot E Dowd; Priyanka Kachroo; Ivan Ivanov; Yasushi Minamoto; Enricka M Dillman; Jörg M Steiner; Audrey K Cook; Linda Toresson
Journal:  PLoS One       Date:  2012-12-26       Impact factor: 3.240

10.  NCBI prokaryotic genome annotation pipeline.

Authors:  Tatiana Tatusova; Michael DiCuccio; Azat Badretdin; Vyacheslav Chetvernin; Eric P Nawrocki; Leonid Zaslavsky; Alexandre Lomsadze; Kim D Pruitt; Mark Borodovsky; James Ostell
Journal:  Nucleic Acids Res       Date:  2016-06-24       Impact factor: 16.971
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