Literature DB >> 33652914

Coupled Feedback Loops Involving PAGE4, EMT and Notch Signaling Can Give Rise to Non-genetic Heterogeneity in Prostate Cancer Cells.

Divyoj Singh1,2, Federico Bocci3,4, Prakash Kulkarni5, Mohit Kumar Jolly1.   

Abstract

Non-genetic heterogeneity is emerging as a crucial factor underlying therapy resistance in multiple cancers. However, the design principles of regulatory networks underlying non-genetic heterogeneity in cancer remain poorly understood. Here, we investigate the coupled dynamics of feedback loops involving (a) oscillations in androgen receptor (AR) signaling mediated through an intrinsically disordered protein PAGE4, (b) multistability in epithelial-mesenchymal transition (EMT), and c) Notch-Delta-Jagged signaling mediated cell-cell communication, each of which can generate non-genetic heterogeneity through multistability and/or oscillations. Our results show how different coupling strengths between AR and EMT signaling can lead to monostability, bistability, or oscillations in the levels of AR, as well as propagation of oscillations to EMT dynamics. These results reveal the emergent dynamics of coupled oscillatory and multi-stable systems and unravel mechanisms by which non-genetic heterogeneity in AR levels can be generated, which can act as a barrier to most existing therapies for prostate cancer patients.

Entities:  

Keywords:  PAGE4; androgen targeted therapy; feedback loops; intrinsically disordered protein; multistability; non-genetic heterogeneity; oscillations; prostate cancer

Year:  2021        PMID: 33652914      PMCID: PMC7996788          DOI: 10.3390/e23030288

Source DB:  PubMed          Journal:  Entropy (Basel)        ISSN: 1099-4300            Impact factor:   2.524


  75 in total

1.  Bacterial persistence as a phenotypic switch.

Authors:  Nathalie Q Balaban; Jack Merrin; Remy Chait; Lukasz Kowalik; Stanislas Leibler
Journal:  Science       Date:  2004-08-12       Impact factor: 47.728

2.  Phenotypic plasticity in development and evolution: facts and concepts. Introduction.

Authors:  Giuseppe Fusco; Alessandro Minelli
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2010-02-27       Impact factor: 6.237

3.  Intrinsically disordered proteins and conformational noise: implications in cancer.

Authors:  Gita Mahmoudabadi; Krithika Rajagopalan; Robert H Getzenberg; Sridhar Hannenhalli; Govindan Rangarajan; Prakash Kulkarni
Journal:  Cell Cycle       Date:  2012-12-19       Impact factor: 4.534

4.  Phosphorylation-induced conformational dynamics in an intrinsically disordered protein and potential role in phenotypic heterogeneity.

Authors:  Prakash Kulkarni; Mohit Kumar Jolly; Dongya Jia; Steven M Mooney; Ajay Bhargava; Luciane T Kagohara; Yihong Chen; Pengyu Hao; Yanan He; Robert W Veltri; Alexander Grishaev; Keith Weninger; Herbert Levine; John Orban
Journal:  Proc Natl Acad Sci U S A       Date:  2017-03-13       Impact factor: 11.205

Review 5.  Nature, nurture, or chance: stochastic gene expression and its consequences.

Authors:  Arjun Raj; Alexander van Oudenaarden
Journal:  Cell       Date:  2008-10-17       Impact factor: 41.582

6.  Human pancreatic islet progenitor cells demonstrate phenotypic plasticity in vitro.

Authors:  Maithili P Dalvi; Malati R Umrani; Mugdha V Joglekar; Anandwardhan A Hardikar
Journal:  J Biosci       Date:  2009-10       Impact factor: 1.826

Review 7.  Phenotypic Plasticity and Cell Fate Decisions in Cancer: Insights from Dynamical Systems Theory.

Authors:  Dongya Jia; Mohit Kumar Jolly; Prakash Kulkarni; Herbert Levine
Journal:  Cancers (Basel)       Date:  2017-06-22       Impact factor: 6.639

8.  Mapping lung cancer epithelial-mesenchymal transition states and trajectories with single-cell resolution.

Authors:  Loukia G Karacosta; Benedict Anchang; Nikolaos Ignatiadis; Samuel C Kimmey; Jalen A Benson; Joseph B Shrager; Robert Tibshirani; Sean C Bendall; Sylvia K Plevritis
Journal:  Nat Commun       Date:  2019-12-06       Impact factor: 14.919

9.  A mechanism for epithelial-mesenchymal heterogeneity in a population of cancer cells.

Authors:  Shubham Tripathi; Priyanka Chakraborty; Herbert Levine; Mohit Kumar Jolly
Journal:  PLoS Comput Biol       Date:  2020-02-10       Impact factor: 4.475

10.  Observation and Control of Gene Expression Noise: Barrier Crossing Analogies Between Drug Resistance and Metastasis.

Authors:  Michael Tyler Guinn; Yiming Wan; Sarah Levovitz; Dongbo Yang; Marsha R Rosner; Gábor Balázsi
Journal:  Front Genet       Date:  2020-10-30       Impact factor: 4.599

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  1 in total

Review 1.  Protein conformational dynamics and phenotypic switching.

Authors:  Prakash Kulkarni; Srisairam Achuthan; Supriyo Bhattacharya; Mohit Kumar Jolly; Sourabh Kotnala; Vitor B P Leite; Atish Mohanty; John Orban; Susmita Roy; Govindan Rangarajan; Ravi Salgia
Journal:  Biophys Rev       Date:  2021-11-27
  1 in total

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