Literature DB >> 33633815

STATISTICAL METHODS FOR ANALYSIS OF COMBINED CATEGORICAL BIOMARKER DATA FROM MULTIPLE STUDIES.

Chao Cheng1,2, Molin Wang1,3,4.   

Abstract

In the analysis of pooled data from multiple studies involving a biomarker exposure, the biomarker measurements can vary across laboratories and usually require calibration to a reference assay prior to pooling. Previous researches consider the measurements from a reference laboratory as the gold standard, even though measurements in the reference laboratory are not necessarily closer to the underlying truth in reality. In this paper we do not treat any laboratory measurements as the gold standard, and we develop two statistical methods, the exact calibration and cut-off calibration methods, for the analysis of aggregated categorical biomarker data. We compare the performance of both methods for estimating the biomarker-disease relationship under a random sample or controls-only calibration design. Our findings include: (1) the exact calibration method provides significantly less biased estimates and more accurate confidence intervals than the other method; (2) the cut-off calibration method could yield estimates with minimal bias and valid confidence intervals under small measurement errors and/or small exposure effects; (3) controls-only calibration design can result in additional bias, but the bias is minimal if the exposure effects and/or disease prevalences are small. Finally, we illustrate the methods in an application evaluating the relationship between circulating vitamin D levels and colorectal cancer risk in a pooling project.

Entities:  

Keywords:  Between-study variability; calibration; categorical biomarker data; measurement error; multiple studies

Year:  2020        PMID: 33633815      PMCID: PMC7903924          DOI: 10.1214/20-aoas1337

Source DB:  PubMed          Journal:  Ann Appl Stat        ISSN: 1932-6157            Impact factor:   2.083


  17 in total

1.  Design and analysis considerations for combining data from multiple biomarker studies.

Authors:  Abigail Sloan; Yue Song; Mitchell H Gail; Rebecca Betensky; Bernard Rosner; Regina G Ziegler; Stephanie A Smith-Warner; Molin Wang
Journal:  Stat Med       Date:  2018-12-19       Impact factor: 2.373

2.  Circulating Vitamin D and Colorectal Cancer Risk: An International Pooling Project of 17 Cohorts.

Authors:  Marjorie L McCullough; Emilie S Zoltick; Stephanie J Weinstein; Veronika Fedirko; Molin Wang; Nancy R Cook; A Heather Eliassen; Anne Zeleniuch-Jacquotte; Claudia Agnoli; Demetrius Albanes; Matthew J Barnett; Julie E Buring; Peter T Campbell; Tess V Clendenen; Neal D Freedman; Susan M Gapstur; Edward L Giovannucci; Gary G Goodman; Christopher A Haiman; Gloria Y F Ho; Ronald L Horst; Tao Hou; Wen-Yi Huang; Mazda Jenab; Michael E Jones; Corinne E Joshu; Vittorio Krogh; I-Min Lee; Jung Eun Lee; Satu Männistö; Loic Le Marchand; Alison M Mondul; Marian L Neuhouser; Elizabeth A Platz; Mark P Purdue; Elio Riboli; Trude Eid Robsahm; Thomas E Rohan; Shizuka Sasazuki; Minouk J Schoemaker; Sabina Sieri; Meir J Stampfer; Anthony J Swerdlow; Cynthia A Thomson; Steinar Tretli; Schoichiro Tsugane; Giske Ursin; Kala Visvanathan; Kami K White; Kana Wu; Shiaw-Shyuan Yaun; Xuehong Zhang; Walter C Willett; Mitchel H Gail; Regina G Ziegler; Stephanie A Smith-Warner
Journal:  J Natl Cancer Inst       Date:  2019-02-01       Impact factor: 13.506

3.  Obesity, weight change, hypertension, diuretic use, and risk of gout in men: the health professionals follow-up study.

Authors:  Hyon K Choi; Karen Atkinson; Elizabeth W Karlson; Gary Curhan
Journal:  Arch Intern Med       Date:  2005-04-11

Review 4.  Use of biomarkers in epidemiologic studies: minimizing the influence of measurement error in the study design and analysis.

Authors:  Shelley S Tworoger; Susan E Hankinson
Journal:  Cancer Causes Control       Date:  2006-09       Impact factor: 2.506

5.  Regression for skewed biomarker outcomes subject to pooling.

Authors:  Emily M Mitchell; Robert H Lyles; Amita K Manatunga; Michelle Danaher; Neil J Perkins; Enrique F Schisterman
Journal:  Biometrics       Date:  2014-02-12       Impact factor: 2.571

6.  Calibration and seasonal adjustment for matched case-control studies of vitamin D and cancer.

Authors:  Mitchell H Gail; Jincao Wu; Molin Wang; Shiaw-Shyuan Yaun; Nancy R Cook; A Heather Eliassen; Marjorie L McCullough; Kai Yu; Anne Zeleniuch-Jacquotte; Stephanie A Smith-Warner; Regina G Ziegler; Raymond J Carroll
Journal:  Stat Med       Date:  2016-01-05       Impact factor: 2.373

7.  Determining vitamin D status: a comparison between commercially available assays.

Authors:  Greta Snellman; Håkan Melhus; Rolf Gedeborg; Liisa Byberg; Lars Berglund; Lisa Wernroth; Karl Michaëlsson
Journal:  PLoS One       Date:  2010-07-13       Impact factor: 3.240

8.  On non-negative estimation of variance components in mixed linear models.

Authors:  Heba A El Leithy; Zakaria A Abdel Wahed; Mohamed S Abdallah
Journal:  J Adv Res       Date:  2015-03-19       Impact factor: 10.479

Review 9.  Pooling biomarker data from different studies of disease risk, with a focus on endogenous hormones.

Authors:  Timothy J Key; Paul N Appleby; Naomi E Allen; Gillian K Reeves
Journal:  Cancer Epidemiol Biomarkers Prev       Date:  2010-03-16       Impact factor: 4.254

10.  Carotenoids, retinol, tocopherols, and prostate cancer risk: pooled analysis of 15 studies.

Authors:  Timothy J Key; Paul N Appleby; Ruth C Travis; Demetrius Albanes; Anthony J Alberg; Aurelio Barricarte; Amanda Black; Heiner Boeing; H Bas Bueno-de-Mesquita; June M Chan; Chu Chen; Michael B Cook; Jenny L Donovan; Pilar Galan; Rebecca Gilbert; Graham G Giles; Edward Giovannucci; Gary E Goodman; Phyllis J Goodman; Marc J Gunter; Freddie C Hamdy; Markku Heliövaara; Kathy J Helzlsouer; Brian E Henderson; Serge Hercberg; Judy Hoffman-Bolton; Robert N Hoover; Mattias Johansson; Kay-Tee Khaw; Irena B King; Paul Knekt; Laurence N Kolonel; Loic Le Marchand; Satu Männistö; Richard M Martin; Haakon E Meyer; Alison M Mondul; Kristin A Moy; David E Neal; Marian L Neuhouser; Domenico Palli; Elizabeth A Platz; Camille Pouchieu; Harri Rissanen; Jeannette M Schenk; Gianluca Severi; Meir J Stampfer; Anne Tjønneland; Mathilde Touvier; Antonia Trichopoulou; Stephanie J Weinstein; Regina G Ziegler; Cindy Ke Zhou; Naomi E Allen
Journal:  Am J Clin Nutr       Date:  2015-10-07       Impact factor: 7.045

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