Literature DB >> 33585199

Next-Generation Sequencing of DDX41 in Myeloid Neoplasms Leads to Increased Detection of Germline Alterations.

Sarah A Bannon1, Mark J Routbort2, Guillermo Montalban-Bravo3, Rohtesh S Mehta4, Fatima Zahra Jelloul2, Koichi Takahashi3, Naval Daver3, Betul Oran4, Naveen Pemmaraju3, Gautam Borthakur3, Kiran Naqvi3, Ghayas Issa3, Koji Sasaki3, Yesid Alvarado3, Tapan M Kadia3, Marina Konopleva3, Rashmi Kanagal Shamanna2, Joseph D Khoury2, Farhad Ravandi3, Richard Champlin4, Hagop M Kantarjian3, Kapil Bhalla3, Guillermo Garcia-Manero3, Keyur P Patel2, Courtney D DiNardo3.   

Abstract

Previously considered rare, inherited hematologic malignancies are increasingly identified. Germline mutations in the RNA helicase DDX41 predispose to increased lifetime risks of myeloid neoplasms with disease often occurring later in life which presents challenges for germline recognition. To improve identification of germline DDX41, individuals presenting with ≥1 DDX41 alteration on an institutional MDS/AML next-generation sequencing based panel with at least one at >40% variant allele frequency were flagged for review and genetic counseling referral. Of 5,801 individuals, 90 (1.5%) had ≥1 DDX41 mutation(s) identified. Thirty-eight (42%) patients with a median age of 66 years were referred for genetic counseling; thirty-one were male (81.5%). Thirty-five (92%) referred patients elected to pursue germline evaluation and in 33/35 (94%) a germline DDX41 variant was confirmed. Twenty-two patients (66%) with germline variants reported antecedent cytopenias, seven (21%) had a prior history of malignancy, and twenty-seven (82%) reported a family history of cancer. Predictive genetic testing for healthy family members under consideration as stem cell transplant donors was successfully performed in 11 family members, taking an average of 15 days. Near-heterozygous DDX41 mutations identified on next-generation sequencing, particularly nonsense/frameshift variants or those at recurrent germline "hot spots" are highly suggestive of a germline mutation. Next-generation sequencing screening is a feasible tool to screen unselected myeloid neoplasms for germline DDX41 mutations, enabling timely and appropriate care.
Copyright © 2021 Bannon, Routbort, Montalban-Bravo, Mehta, Jelloul, Takahashi, Daver, Oran, Pemmaraju, Borthakur, Naqvi, Issa, Sasaki, Alvarado, Kadia, Konopleva, Shamanna, Khoury, Ravandi, Champlin, Kantarjian, Bhalla, Garcia-Manero, Patel and DiNardo.

Entities:  

Keywords:  AML; DDX41; MDS; germline; hereditary

Year:  2021        PMID: 33585199      PMCID: PMC7878971          DOI: 10.3389/fonc.2020.582213

Source DB:  PubMed          Journal:  Front Oncol        ISSN: 2234-943X            Impact factor:   5.738


  19 in total

1.  Donor cell leukemia arising from preleukemic clones with a novel germline DDX41 mutation after allogenic hematopoietic stem cell transplantation.

Authors:  S Kobayashi; A Kobayashi; Y Osawa; S Nagao; K Takano; Y Okada; N Tachi; M Teramoto; T Kawamura; T Horiuchi; S Kato; T Maekawa; T Yamamura; J Watanabe; Y Harada; H Harada; K Sato; F Kimura
Journal:  Leukemia       Date:  2017-02-14       Impact factor: 11.528

2.  Novel germ line DDX41 mutations define families with a lower age of MDS/AML onset and lymphoid malignancies.

Authors:  Maya Lewinsohn; Anna L Brown; Luke M Weinel; Connie Phung; George Rafidi; Ming K Lee; Andreas W Schreiber; Jinghua Feng; Milena Babic; Chan-Eng Chong; Young Lee; Agnes Yong; Graeme K Suthers; Nicola Poplawski; Meryl Altree; Kerry Phillips; Louise Jaensch; Miriam Fine; Richard J D'Andrea; Ian D Lewis; Bruno C Medeiros; Daniel A Pollyea; Mary-Claire King; Tom Walsh; Siobán Keel; Akiko Shimamura; Lucy A Godley; Christopher N Hahn; Jane E Churpek; Hamish S Scott
Journal:  Blood       Date:  2015-12-28       Impact factor: 22.113

Review 3.  Improving the detection of patients with inherited predispositions to hematologic malignancies using next-generation sequencing-based leukemia prognostication panels.

Authors:  Courtney D DiNardo; Mark J Routbort; Sarah A Bannon; Christopher B Benton; Koichi Takahashi; Steve M Kornblau; Rajyalakshmi Luthra; Rashmi Kanagal-Shamanna; L Jeffrey Medeiros; Guillermo Garcia-Manero; Hagop M Kantarjian; P Andrew Futreal; Funda Meric-Bernstam; Keyur P Patel
Journal:  Cancer       Date:  2018-04-06       Impact factor: 6.860

Review 4.  Myeloid neoplasms with germline DDX41 mutation.

Authors:  Jesse J C Cheah; Christopher N Hahn; Devendra K Hiwase; Hamish S Scott; Anna L Brown
Journal:  Int J Hematol       Date:  2017-05-25       Impact factor: 2.490

Review 5.  Proposal for the clinical detection and management of patients and their family members with familial myelodysplastic syndrome/acute leukemia predisposition syndromes.

Authors:  Jane E Churpek; Rachelle Lorenz; Siya Nedumgottil; Kenan Onel; Olufunmilayo I Olopade; April Sorrell; Carolyn J Owen; Alison A Bertuch; Lucy A Godley
Journal:  Leuk Lymphoma       Date:  2012-07-09

6.  The helicase DDX41 senses intracellular DNA mediated by the adaptor STING in dendritic cells.

Authors:  Zhiqiang Zhang; Bin Yuan; Musheng Bao; Ning Lu; Taeil Kim; Yong-Jun Liu
Journal:  Nat Immunol       Date:  2011-09-04       Impact factor: 25.606

7.  Evaluation of Patients and Families With Concern for Predispositions to Hematologic Malignancies Within the Hereditary Hematologic Malignancy Clinic (HHMC).

Authors:  Courtney D DiNardo; Sarah A Bannon; Mark Routbort; Anna Franklin; Maureen Mork; Mary Armanios; Emily M Mace; Jordan S Orange; Meselle Jeff-Eke; Jane E Churpek; Koichi Takahashi; Jeffrey L Jorgensen; Guillermo Garcia-Manero; Steve Kornblau; Alison Bertuch; Hannah Cheung; Kapil Bhalla; Andrew Futreal; Lucy A Godley; Keyur P Patel
Journal:  Clin Lymphoma Myeloma Leuk       Date:  2016-04-27

8.  Genomic analysis of germ line and somatic variants in familial myelodysplasia/acute myeloid leukemia.

Authors:  Jane E Churpek; Khateriaa Pyrtel; Krishna-Latha Kanchi; Jin Shao; Daniel Koboldt; Christopher A Miller; Dong Shen; Robert Fulton; Michelle O'Laughlin; Catrina Fronick; Iskra Pusic; Geoffrey L Uy; Evan M Braunstein; Mark Levis; Julie Ross; Kevin Elliott; Sharon Heath; Allan Jiang; Peter Westervelt; John F DiPersio; Daniel C Link; Matthew J Walter; John Welch; Richard Wilson; Timothy J Ley; Lucy A Godley; Timothy A Graubert
Journal:  Blood       Date:  2015-10-22       Impact factor: 22.113

9.  Inherited and Somatic Defects in DDX41 in Myeloid Neoplasms.

Authors:  Chantana Polprasert; Isabell Schulze; Mikkael A Sekeres; Hideki Makishima; Bartlomiej Przychodzen; Naoko Hosono; Jarnail Singh; Richard A Padgett; Xiaorong Gu; James G Phillips; Michael Clemente; Yvonne Parker; Daniel Lindner; Brittney Dienes; Eckhard Jankowsky; Yogen Saunthararajah; Yang Du; Kevin Oakley; Nhu Nguyen; Sudipto Mukherjee; Caroline Pabst; Lucy A Godley; Jane E Churpek; Daniel A Pollyea; Utz Krug; Wolfgang E Berdel; Hans-Ulrich Klein; Martin Dugas; Yuichi Shiraishi; Kenichi Chiba; Hiroko Tanaka; Satoru Miyano; Kenichi Yoshida; Seishi Ogawa; Carsten Müller-Tidow; Jaroslaw P Maciejewski
Journal:  Cancer Cell       Date:  2015-04-23       Impact factor: 31.743

10.  Clinical utility of gene panel-based testing for hereditary myelodysplastic syndrome/acute leukemia predisposition syndromes.

Authors:  L Guidugli; A K Johnson; G Alkorta-Aranburu; V Nelakuditi; K Arndt; J E Churpek; L A Godley; D Townsley; N S Young; C Fitzpatrick; D Del Gaudio; S Das; Z Li
Journal:  Leukemia       Date:  2017-01-20       Impact factor: 11.528

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  7 in total

1.  DDX41 is required for cGAS-STING activation against DNA virus infection.

Authors:  Ravi Shankar Singh; Venkatasubramanian Vidhyasagar; Shizhuo Yang; Ananna Bhadra Arna; Manisha Yadav; Aanchal Aggarwal; Alexya N Aguilera; Satoru Shinriki; Kalpana Kalyanasundaram Bhanumathy; Kannupriya Pandey; Aizhang Xu; Noreen Rapin; Mark Bosch; John DeCoteau; Jim Xiang; Franco J Vizeacoumar; Yan Zhou; Vikram Misra; Hirotaka Matsui; Susan R Ross; Yuliang Wu
Journal:  Cell Rep       Date:  2022-05-24       Impact factor: 9.995

2.  Genetic features and clinical outcomes of patients with isolated and comutated DDX41-mutated myeloid neoplasms.

Authors:  Hassan B Alkhateeb; Ahmad Nanaa; David Viswanatha; James M Foran; Talha Badar; Lisa Sproat; Rong He; Phuong Nguyen; Dragan Jevremovic; Mohamad E Salama; Patricia Greipp; Naseema Gangat; Ayalew Tefferi; Mark R Litzow; Abhishek A Mangaonkar; Mithun Vinod Shah; Mrinal Patnaik; Aref Al-Kali
Journal:  Blood Adv       Date:  2022-01-25

3.  A novel bi-alleleic DDX41 mutations in B-cell lymphoblastic leukemia: case report.

Authors:  Woo Yong Shin; Seug Yun Yoon; Rojin Park; Jung-Ah Kim; Ho Hyun Song; Hae In Bang; Jong-Ho Won; Jieun Kim
Journal:  BMC Med Genomics       Date:  2022-03-04       Impact factor: 3.063

Review 4.  Unique role of DDX41, a DEAD-box type RNA helicase, in hematopoiesis and leukemogenesis.

Authors:  Satoru Shinriki; Hirotaka Matsui
Journal:  Front Oncol       Date:  2022-09-02       Impact factor: 5.738

Review 5.  Adult-onset hereditary myeloid malignancy and allogeneic stem cell transplantation.

Authors:  Takashi Toya; Hironori Harada; Yuka Harada; Noriko Doki
Journal:  Front Oncol       Date:  2022-09-16       Impact factor: 5.738

Review 6.  Therapeutic Advances in Immunotherapies for Hematological Malignancies.

Authors:  Ayako Nogami; Koji Sasaki
Journal:  Int J Mol Sci       Date:  2022-09-29       Impact factor: 6.208

Review 7.  Clinical features of DDX41 mutation-related diseases: a systematic review with individual patient data.

Authors:  Ziqi Wan; Bing Han
Journal:  Ther Adv Hematol       Date:  2021-07-16
  7 in total

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