| Literature DB >> 34349893 |
Abstract
BACKGROUND: DDX41 serves as a DNA sensor in innate immunity and mutated DDX41 is pathogenic, mainly for myeloid neoplasms.Entities:
Keywords: DDX41 mutation; germline; hematologic; somatic
Year: 2021 PMID: 34349893 PMCID: PMC8287267 DOI: 10.1177/20406207211032433
Source DB: PubMed Journal: Ther Adv Hematol ISSN: 2040-6207
Figure 1.PRISMA flow diagram of selected studies.
One hundred publications and 95 publications were identified in PubMed and Web of Science, respectively. After deleting duplicates and going through title and abstract review, 107 remained. We excluded 77 publications. The remaining 30 were next given a full-text review and none was excluded. Thus, 30 articles were included in the qualitative analysis, and 20 were included in the quantitative summary but not a meta-analysis.
PRISMA, Preferred Reporting Items for Systematic Reviews and Meta-Analyses.
Clinical features of 277 patients with DDX41-related hematologic diseases.
| Parameter |
| Percentage |
|---|---|---|
| Total | 277 | 100.0 |
| Case series | 258 | 93.1 |
| Case reports | 19 | 6.9 |
| Age at diagnosis, median (range) years | 66 (20–88) | |
| <50 | 23 | 8.3 |
| 50–59 | 40 | 14.4 |
| 60–69 | 105 | 37.9 |
| 70–79 | 87 | 31.4 |
| 80–88 | 14 | 5.1 |
| NA | 8 | 2.9 |
| Gender | ||
| Male | 222 | 80.1 |
| Female | 52 | 18.8 |
| NA | 3 | 1.1 |
| Nationality | ||
| American | 115 | 41.5 |
| Chinese | 48 | 17.3 |
| French | 43 | 15.5 |
| Korean | 40 | 14.4 |
| Australian | 10 | 3.6 |
| British | 9 | 3.2 |
| Thai | 6 | 2.2 |
| Caucasian | 3 | 1.1 |
| Italian | 1 | 0.4 |
| Spanish | 1 | 0.4 |
| NA | 1 | 0.4 |
| Karyotype | ||
| Normal | 177 | 63.9 |
| Abnormal | 57 | 20.6 |
| +8 | 7 | 2.5 |
| -Y | 6 | 2.2 |
| del 5q | 6 | 2.2 |
| del 20q | 6 | 2.2 |
| Complex | 10 | 3.6 |
| Non-complex
| 22 | 7.9 |
| NA | 43 | 15.5 |
| Diagnosis | ||
| MDS | 115 | 41.5 |
| AML | 91 | 32.9 |
| MPN | 11 | 4.0 |
| ICUS | 6 | 2.2 |
| t-MDS | 4 | 1.4 |
| Follicular lymphoma | 3 | 1.1 |
| Aplastic anemia | 3 | 1.1 |
| MDS/MPN | 3 | 1.1 |
| t-AML | 3 | 1.1 |
| MDS/AML | 2 | 0.7 |
| CLL | 1 | 0.4 |
| CML/AML | 1 | 0.4 |
| Neutropenia | 1 | 0.4 |
| None | 1 | 0.4 |
| NA | 32 | 11.6 |
| Family history | ||
| Clear | 94 | 33.9 |
| None | 139 | 50.2 |
| NA | 44 | 15.9 |
Nine cases were confirmed as non-complex but karyotypes were not clear.
AML, acute myeloid leukemia; CLL, chronic lymphoid leukemia; CML, chronic myeloid leukemia; ICUS, idiopathic cytopenia of undetermined significance; MDS, myelodysplastic syndrome; MPN, myeloproliferative neoplasms; NA, not available; t-AML, therapy-related AML; t-MDS, therapy-related MDS.
Figure 2.Age, nationality, and karyotype of 277 patients with DDX41-mutated hematologic diseases.
(a) Groups of age at diagnosis, where 69.3% were in the 60s and 70s. (b) National distributions. American was the greatest [115 (41.5%)], followed by 48 Chinese (17.3%), 43 French (15.5%) and 40 Korean (14.4%). Other nationality groups contained 10 cases at most. (c) Cytogenetics. The portion of normal karyotype was 63.9% (n = 177). Karyotypes of 57 patients (20.6%) were described as abnormal: seven trisomy 8, six -Y, six del (5q), six del (20q), 10 complex, and 22 other less common non-complex*.
NA, not available.
*Other non-complex chromosomal abnormalities were detailed in Table S2.
Figure 3.DDX41 protein map based on 20 population studies.
A total of 239 germline variants and 188 somatic variants are presented here (one somatic splicing variant was excluded because of no available site information). For germline mutants, missense variants composed the largest part (n = 124, 52%), followed by frameshift (n = 76, 32%), nonsense (n = 20, 8%), splicing (n = 14, 6%), and last in-frame deletion/duplication (n = 5, 2%). The top five germline variants were p.D140fs (n = 39), p.M1I (n = 29), p.V152G (n = 12), p.Y259C (n = 10), p.A500fs (n = 7). They showed apparent difference in different countries: p.M1I and p.D140fs in the USA, p.V152G, p.Y259C and p.A500fs in Korea and China. For somatic variants, missense variants still contributed greatest (n = 181, 96%), followed by splicing (n = 3), frameshift (n = 2), nonsense (n = 2), and last in-frame deletion (n = 1). Different from diverse sites of frequent germline DDX41 mutants, the most common somatic variant was p.R525H, which accounted for 64% (n = 113) of the variants and was consistent in all countries. The other frequent somatic variants of DDX41 were p.T227M (n = 12), p.P321L (n = 9), and p.G530D (n = 6).
ATP, adenosine triphosphate; Znf, zinc finger.