Literature DB >> 33555053

The eukaryotic replisome tolerates leading-strand base damage by replicase switching.

Thomas A Guilliam1, Joseph Tp Yeeles1.   

Abstract

The high-fidelity replicative DNA polymerases, Pol ε and Pol δ, are generally thought to be poorly equipped to replicate damaged DNA. Direct and complete replication of a damaged template therefore typically requires the activity of low-fidelity translesion synthesis (TLS) polymerases. Here we show that a yeast replisome, reconstituted with purified proteins, is inherently tolerant of the common oxidative lesion thymine glycol (Tg). Surprisingly, leading-strand Tg was bypassed efficiently in the presence and absence of the TLS machinery. Our data reveal that following helicase-polymerase uncoupling a switch from Pol ε, the canonical leading-strand replicase, to the lagging-strand replicase Pol δ, facilitates rapid, efficient and error-free lesion bypass at physiological nucleotide levels. This replicase switch mechanism also promotes bypass of the unrelated oxidative lesion, 8-oxoguanine. We propose that replicase switching may promote continued leading-strand synthesis whenever the replisome encounters leading-strand damage that is bypassed more efficiently by Pol δ than by Pol ε.
© 2021 MRC Laboratory of Molecular Biology. Published under the terms of the CC BY 4.0 license.

Entities:  

Keywords:  DNA damage tolerance; DNA polymerase; DNA replication; replisome; translesion synthesis

Mesh:

Substances:

Year:  2021        PMID: 33555053      PMCID: PMC7917549          DOI: 10.15252/embj.2020107037

Source DB:  PubMed          Journal:  EMBO J        ISSN: 0261-4189            Impact factor:   14.012


  43 in total

Review 1.  Eukaryotic translesion polymerases and their roles and regulation in DNA damage tolerance.

Authors:  Lauren S Waters; Brenda K Minesinger; Mary Ellen Wiltrout; Sanjay D'Souza; Rachel V Woodruff; Graham C Walker
Journal:  Microbiol Mol Biol Rev       Date:  2009-03       Impact factor: 11.056

Review 2.  An updated perspective on the polymerase division of labor during eukaryotic DNA replication.

Authors:  Thomas A Guilliam; Joseph T P Yeeles
Journal:  Crit Rev Biochem Mol Biol       Date:  2020-09-03       Impact factor: 8.250

3.  Translesion synthesis by human DNA polymerase eta across thymine glycol lesions.

Authors:  Rika Kusumoto; Chikahide Masutani; Shigenori Iwai; Fumio Hanaoka
Journal:  Biochemistry       Date:  2002-05-14       Impact factor: 3.162

Review 4.  Causes and consequences of replication stress.

Authors:  Michelle K Zeman; Karlene A Cimprich
Journal:  Nat Cell Biol       Date:  2014-01       Impact factor: 28.824

5.  The translesion DNA polymerases Pol ζ and Rev1 are activated independently of PCNA ubiquitination upon UV radiation in mutants of DNA polymerase δ.

Authors:  Carine Tellier-Lebegue; Eléa Dizet; Emilie Ma; Xavier Veaute; Eric Coïc; Jean-Baptiste Charbonnier; Laurent Maloisel
Journal:  PLoS Genet       Date:  2017-12-27       Impact factor: 5.917

6.  Dynamics of Replication Fork Progression Following Helicase-Polymerase Uncoupling in Eukaryotes.

Authors:  Martin R G Taylor; Joseph T P Yeeles
Journal:  J Mol Biol       Date:  2019-03-17       Impact factor: 5.469

Review 7.  DNA polymerase ζ in DNA replication and repair.

Authors:  Sara K Martin; Richard D Wood
Journal:  Nucleic Acids Res       Date:  2019-09-19       Impact factor: 16.971

8.  The eukaryotic replisome tolerates leading-strand base damage by replicase switching.

Authors:  Thomas A Guilliam; Joseph Tp Yeeles
Journal:  EMBO J       Date:  2021-02-08       Impact factor: 14.012

9.  DNA damage alters DNA polymerase delta to a form that exhibits increased discrimination against modified template bases and mismatched primers.

Authors:  Xiao Meng; Yajing Zhou; Sufang Zhang; Ernest Y C Lee; David N Frick; Marietta Y W T Lee
Journal:  Nucleic Acids Res       Date:  2008-12-11       Impact factor: 16.971

10.  The eukaryotic leading and lagging strand DNA polymerases are loaded onto primer-ends via separate mechanisms but have comparable processivity in the presence of PCNA.

Authors:  Olga Chilkova; Peter Stenlund; Isabelle Isoz; Carrie M Stith; Pawel Grabowski; Else-Britt Lundström; Peter M Burgers; Erik Johansson
Journal:  Nucleic Acids Res       Date:  2007-09-28       Impact factor: 16.971

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  9 in total

Review 1.  Post-Translational Modifications of PCNA: Guiding for the Best DNA Damage Tolerance Choice.

Authors:  Gemma Bellí; Neus Colomina; Laia Castells-Roca; Neus P Lorite
Journal:  J Fungi (Basel)       Date:  2022-06-10

2.  The mechanism of replication stalling and recovery within repetitive DNA.

Authors:  Corella S Casas-Delucchi; Manuel Daza-Martin; Sophie L Williams; Gideon Coster
Journal:  Nat Commun       Date:  2022-07-19       Impact factor: 17.694

3.  Increased expression of Polδ does not alter the canonical replication program in vivo.

Authors:  Róbert Zach; Antony M Carr
Journal:  Wellcome Open Res       Date:  2021-05-04

4.  The eukaryotic replisome tolerates leading-strand base damage by replicase switching.

Authors:  Thomas A Guilliam; Joseph Tp Yeeles
Journal:  EMBO J       Date:  2021-02-08       Impact factor: 14.012

Review 5.  Repriming DNA synthesis: an intrinsic restart pathway that maintains efficient genome replication.

Authors:  Lewis J Bainbridge; Rebecca Teague; Aidan J Doherty
Journal:  Nucleic Acids Res       Date:  2021-05-21       Impact factor: 16.971

Review 6.  Beyond the Lesion: Back to High Fidelity DNA Synthesis.

Authors:  Joseph D Kaszubowski; Michael A Trakselis
Journal:  Front Mol Biosci       Date:  2022-01-05

Review 7.  Observing protein dynamics during DNA-lesion bypass by the replisome.

Authors:  Elise M Wilkinson; Lisanne M Spenkelink; Antoine M van Oijen
Journal:  Front Mol Biosci       Date:  2022-09-21

Review 8.  Mechanisms for Maintaining Eukaryotic Replisome Progression in the Presence of DNA Damage.

Authors:  Thomas A Guilliam
Journal:  Front Mol Biosci       Date:  2021-07-06

9.  Parental histone deposition on the replicated strands promotes error-free DNA damage tolerance and regulates drug resistance.

Authors:  Valeria Dolce; Sabrina Dusi; Michele Giannattasio; Chinnu Rose Joseph; Marco Fumasoni; Dana Branzei
Journal:  Genes Dev       Date:  2022-02-03       Impact factor: 12.890

  9 in total

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