| Literature DB >> 33553912 |
Maheshwara Reddy Nadiveedhi1, Poojith Nuthalapati2, Mohan Gundluru1,3, Mohan Reddy Yanamula4, Saritha Venkatareddy Kallimakula4, Visweswara Rao Pasupuleti5, Vijaya Kumar Reddy Avula6, Swetha Vallela6, Grigory Vasilievich Zyryanov6,7, Satheesh Krishna Balam1, Suresh Reddy Cirandur1.
Abstract
A series of novel α-furfuryl-2-alkylEntities:
Year: 2021 PMID: 33553912 PMCID: PMC7860093 DOI: 10.1021/acsomega.0c05302
Source DB: PubMed Journal: ACS Omega ISSN: 2470-1343
Scheme 1Synthesis of α-Furfuryl-2-alkylaminophosphonates (5a–j)
Optimization of Synthesis of 5aa
| temperature (°C) | microwave irradiation (W) | catalyst (10 mol %) | time (min) | isolated
yield (%) |
|---|---|---|---|---|
| 25 | 100 | _ | 60 | 10.24 |
| 25 | 200 | _ | 60 | 12.49 |
| 25 | 300 | _ | 60 | 15.17 |
| 25 | 400 | _ | 60 | 20.66 |
| 25 | 500 | _ | 60 | 25.48 |
| 25 | 600 | _ | 60 | 32.59 |
| 25 | 700 | _ | 60 | 32.38 |
| 25 | 800 | _ | 60 | 20.27 |
| 30 | 600 | _ | 60 | 32.69 |
| 40 | 600 | _ | 60 | 35.74 |
| 50 | 600 | _ | 60 | 35.93 |
| 60 | 600 | _ | 60 | 25.87 |
| 40 | 600 | Al2O3 | 45 | 51.79 |
| 40 | 600 | SiO2 | 42 | 66.30 |
| 40 | 600 | Al(OTf)3 | 40 | 70.52 |
| 40 | 600 | nano Al2O3 | 43 | 57.95 |
| 40 | 600 | BF3EtO | 40 | 63.41 |
| 40 | 600 | I2 | 35 | 76.54 |
| 40 | 600 | SiO2–I2 | 20 | 92.29 |
Reaction conditions: diethyl phosphite (3a), vanillin-derived Schiff base (4), and SiO2–I2 as the catalyst.
Isolated yield.
Reaction Time and Yield of the Products 5a–j
| entry | reaction time (min) | isolated yield (%) |
|---|---|---|
| 20 | 92.35 | |
| 22 | 90.42 | |
| 15 | 95.28 | |
| 22 | 89.41 | |
| 15 | 96.53 | |
| 25 | 85.17 | |
| 20 | 90.34 | |
| 25 | 83.76 | |
| 15 | 93.89 | |
| 22 | 85.06 |
Figure 1Mechanism for SiO2–I2-catalyzed synthesis.
Figure 2DPPH radical scavenging activity of 5a–j.
Figure 3H2O2 radical scavenging activity of 5a–j.
Figure 4Plant growth regulatory activity of compounds 5a–j.
Potential Protein–Ligand Interactions of 5a–j with Chain C of Protein 1DNU at GLN340 Amino Acid Residuea
Docking poses of 5a–j, GLN340 in chain C of 1DNU protein and chain C of 1DNU protein (in order—top left to bottom right).
Molecular Docking Interactions of 5a–j with Chain A of Protein 4M7E at TYR597 Amino Acid Residue
| S. no. | cluster number | cluster rank | binding energy (kcal/mol) | no. of hydrogen bonds | H-bond ligand atoms | H-bond receptor atoms | binding interaction | bond length (Å) | H-bond type |
|---|---|---|---|---|---|---|---|---|---|
| 2 | 1 | –8.0654 | 1 | 1 | 1 | ligand(P–C(H)–NH)···(O–H)TYR597 | 1.9397 | acceptor | |
| 33 | 1 | –8.1484 | 1 | 1 | 1 | ligand(P–C(H)–NH)···(O–H)TYR597 | 1.9236 | acceptor | |
| 0 | 0 | –7.9312 | 1 | 1 | 1 | ligand(P–C(H)–NH)···(O–H)TYR597 | 2.1007 | acceptor | |
| 6 | 6 | –7.9150 | 1 | 1 | 1 | ligand(P–C(H)–NH)···(O–H)TYR597 | 2.3359 | acceptor | |
| 20 | 1 | –7.8425 | 1 | 1 | 1 | ligand(P–C(H)–NH)···(O–H)TYR597 | 2.7589 | acceptor | |
| 40 | 0 | –7.6491 | 1 | 1 | 1 | ligand(P–C(H)–NH)···(O–H)TYR597 | 2.0703 | acceptor | |
| 1 | 3 | –7.6353 | 1 | 1 | 1 | ligand(P–C(H)–NH)···(O–H)TYR597 | 2.3484 | acceptor | |
| 2 | 1 | –7.8134 | 1 | 1 | 1 | ligand(P–C(H)–NH)···(O–H)TYR597 | 2.3462 | acceptor | |
| 21 | 2 | –7.9364 | 1 | 1 | 1 | ligand(P–C(H)–NH)···(O–H)TYR597 | 2.3557 | acceptor | |
| 22 | 1 | –7.3909 | 1 | 1 | 1 | ligand(P–C(H)–NH)···(O–H)TYR597 | 2.2885 | acceptor |
ADMET Properties of 5a–j
| entry | human intestinal
absorption(HIA, %) | toxicity | ||||
|---|---|---|---|---|---|---|
| 1.2749 | 21.7129 | 89.5313 | 191.0100 | 95.7056 | negative | |
| 2.5729 | 21.7217 | 97.2754 | 79.4515 | 99.2126 | negative | |
| 0.4368 | 21.7072 | 89.8057 | 122.3450 | 90.6733 | negative | |
| 0.4900 | 18.8444 | 94.9217 | 27.9760 | 91.1146 | negative | |
| 0.6212 | 21.7231 | 94.1342 | 74.8857 | 96.2773 | negative | |
| 1.2911 | 21.4068 | 96.4950 | 38.0802 | 98.2989 | negative | |
| 0.7318 | 21.6890 | 88.5328 | 186.4370 | 93.6175 | negative | |
| 0.4699 | 21.7074 | 92.7086 | 87.8067 | 93.2263 | negative | |
| 0.4518 | 21.6737 | 86.9710 | 122.9902 | 94.1828 | negative | |
| 0.4560 | 16.1225 | 94.4193 | 29.6239 | 94.1007 | negative |
BBB penetration = [brain]/[blood].
Caco-2 cells derived from human colon adenocarcinoma, possessing multiple drug transport pathways through intestinal epithelium.
HIA (human intestinal absorption), the sum of absorption and bioavailability evaluated from ratio of excretion in urine, bile, and feces.
MDCK cell system is used as a tool for rapid permeability screening.
% of drug that binds to plasma protein.
In vitro Ames test by metabolic and nonmetabolic activated TA100 and TA1535 strains collected from rat liver homogenate.
Molecular Descriptor Properties of 5a–ja
| Lipinski
parameters | Veber parameters | other parameters | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| entry | MW | HB Don | HB Acc | log | MR | Lip. Vio. | TPSA | no. of RB | Veb. Vio. | no. of H | V. Vol. | ρ | CLP | % ABS | |
| 362.37 | 6 | 2 | 2.08 | 96.64 | 0 | 86.30 | 9 | 0 | 25 | 325.07 | 1.246 | –3.61 | 2.52 | 79.23 | |
| 447.47 | 5 | 1 | 4.24 | 126.18 | 0 | 60.71 | 9 | 0 | 32 | 400.65 | 1.275 | –3.54 | 3.19 | 88.06 | |
| 369.35 | 7 | 2 | 2.23 | 93.67 | 0 | 99.97 | 10 | 0 | 25 | 329.66 | 1.228 | –2.81 | 1.74 | 74.51 | |
| 448.25 | 7 | 2 | 3.02 | 101.3 | 0 | 99.97 | 10 | 0 | 26 | 347.54 | 1.414 | –3.64 | 2.46 | 74.51 | |
| 413.41 | 8 | 1 | 2.01 | 104.91 | 0 | 98.20 | 12 | 0 | 28 | 372.73 | 1.180 | –3.14 | 1.95 | 75.12 | |
| 420.21 | 5 | 1 | 3.70 | 93.36 | 0 | 70.51 | 9 | 0 | 24 | 318.91 | 1.407 | –4.24 | 2.89 | 84.67 | |
| 334.31 | 6 | 2 | 1.77 | 87.14 | 0 | 76.50 | 7 | 0 | 23 | 291.47 | 1.297 | –3.01 | 1.38 | 82.60 | |
| 339.28 | 7 | 1 | 1.51 | 81.79 | 0 | 89.17 | 7 | 0 | 23 | 286.42 | 1.323 | –3.20 | 1.45 | 78.24 | |
| 341.30 | 7 | 7 | 0.96 | 84.18 | 0 | 99.17 | 8 | 0 | 23 | 296.05 | 1.275 | –2.21 | 1.20 | 74.78 | |
| 420.20 | 7 | 2 | 1.92 | 91.80 | 0 | 99.37 | 8 | 0 | 24 | 313.94 | 1.480 | –3.04 | 1.65 | 74.72 | |
MW: molecular weight; HB Don: hydrogen bond donors (n ON); HB Acc: hydrogen bond acceptors (n OH NH); log P: log of octanol to water partition coefficient; MR: molecular refractivity (cm3/mol); Lip. Vio.: lipinski violations; TPSA: total polar surface area (Å)2; no. of RB: number of rotatable bonds; Veb. Vio.: Veber violations; no. of “H”: number of hydrophobic atoms; V. Vol.: van der Waals volume; ρ: density (gm/cc); S: solubility; CLP: clog P; and % ABS: % of absorption.
Molecular Fingerprint Properties of 5a–ja
| entry | point group | H.F. (kcal/mol) | T.E. (eV) | E.E. (eV) | C.C.R. (eV) | G.N. | dipole (Debye) | no. of F.L. | I.P. (eV) | H.E. (eV) | L.E. (eV) | C.A. (Å2) | C.V. (Å3) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C1 | –106.66 | –4165.36 | –31020.65 | 26855.30 | 0.98 | 1.89 | 64 | 8.36 | –8.36 | 0.07 | 375.31 | 430.50 | |
| C1 | –105.79 | –4165.32 | –31142.12 | 26976.79 | 0.94 | 1.84 | 64 | 8.14 | –8.14 | 0.30 | 372.69 | 431.76 | |
| C1 | –209.24 | –4489.49 | –33075.83 | 28586.33 | 0.92 | 2.49 | 66 | 8.79 | –8.79 | –0.05 | 370.76 | 440.94 | |
| C1 | –209.11 | –4823.17 | –35478.33 | 30655.16 | 0.99 | 2.09 | 69 | 8.91 | –8.91 | –0.24 | 386.63 | 463.71 | |
| C1 | –241.18 | –5123.82 | –40651.74 | 35527.92 | 0.90 | 1.53 | 75 | 9.07 | –9.0 | –0.30 | 402.91 | 497.09 | |
| C1 | –167.25 | –4487.54 | –30712.54 | 26224.99 | 0.97 | 1.97 | 63 | 9.17 | –9.17 | –0.60 | 365.74 | 429.05 | |
| C1 | –96.74 | –3852.44 | –26907.70 | 23055.26 | 0.99 | 1.81 | 58 | 8.38 | –8.38 | 0.06 | 335.01 | 384.06 | |
| C1 | –187.95 | –4147.75 | –27663.14 | 23515.38 | 0.91 | 1.84 | 59 | 8.86 | –8.86 | –0.20 | 330.80 | 375.71 | |
| C1 | –202.23 | –4176.70 | –28679.19 | 24502.48 | 0.98 | 2.43 | 60 | 8.73 | –8.73 | 0.05 | 335.26 | 391.00 | |
| C1 | –199.95 | –4510.28 | –30781.31 | 26271.03 | 0.95 | 0.82 | 63 | 9.09 | –9.09 | –0.38 | 357.86 | 417.55 |
H.F.: heat of formation; T.E.: total energy; E.E.: electronic energy; C.C.R: core–core repulsion; G.N.: gradient norm; F.L.: filled levels; I.P.: ionization potential; H.E.: HOMO energy; L.E.: LUMO energy; C.A.: COSMO area; and C.V.: COSMO volume.
Bioactivity Scores, Drug Properties, and Toxicity Risks of 5a–ja
| bioactivity | drug properties | toxicity risks | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| entry | GPCRL | ICM | KI | NRL | PI | EI | drug-likeness | drug score | Mut | Tum | Irrit | R.E. |
| –0.20 | 0.14 | –0.20 | –0.46 | 0.01 | 0.11 | –32.76 | 0.42 | green | green | green | green | |
| –0.24 | 0.07 | –0.27 | –0.33 | 0.02 | 0.10 | –34.08 | 0.08 | green | green | green | green | |
| –0.46 | 0.01 | –0.47 | –0.51 | –0.07 | 0.02 | –33.04 | 0.43 | green | green | green | green | |
| –0.64 | –0.12 | –0.56 | –0.68 | –0.23 | –0.11 | –34.72 | 0.33 | green | green | green | green | |
| –0.45 | –0.04 | –0.44 | –0.59 | –0.09 | –0.03 | –30.14 | 0.44 | green | green | green | green | |
| –0.49 | –0.04 | –0.46 | –0.62 | –0.18 | –0.08 | –38.50 | 0.34 | green | green | green | green | |
| –0.21 | 0.20 | –0.29 | –0.58 | 0.01 | 0.15 | –25.33 | 0.16 | green | green | green | green | |
| –0.47 | –0.01 | –0.65 | –0.75 | –0.06 | 0.10 | –25.97 | 0.15 | green | green | green | green | |
| –0.47 | 0.06 | –0.57 | –0.61 | –0.07 | 0.06 | –25.68 | 0.16 | green | green | green | green | |
| –0.66 | –0.07 | –0.66 | –0.79 | –0.22 | –0.08 | –27.42 | 0.14 | green | green | green | green | |
GPCRL: G protein-coupled receptor ligand; ICM: ion channel modulator; KI: kinase inhibitor; NRL: nuclear receptor ligand; PI: protease inhibitor; EI: enzyme inhibitor; Mut: mutagenic; Tum: tumorigenic; Irrit: irritant; R.E.: reproductive effect; green: green color indicates drug-conform behavior.
Figure 5Structure–activity relationship of 5a–j.
Molecular Docking Interactions of 5a–j with Chain C of Protein 1DNU at GLN340 Amino Acid Residue
| S. no. | cluster number | cluster rank | binding energy (kcal/mol) | no. of hydrogen bonds | H-bond ligand atoms | H-bond receptor atoms | binding interaction | bond length (Å) | H-bond type |
|---|---|---|---|---|---|---|---|---|---|
| 4 | 1 | –8.2531 | 1 | 1 | 1 | ligand(P=O)···(HN)GLN340 | 2.4025 | donor | |
| 1 | 4 | –9.2938 | 1 | 1 | 1 | ligand(P=O)···(HN)GLN340 | 2.4223 | donor | |
| 0 | 0 | –8.2422 | 1 | 1 | 1 | ligand(P=O)···(HN)GLN340 | 2.3590 | donor | |
| 5 | 5 | –8.6906 | 1 | 1 | 1 | ligand(P=O)···(HN)GLN340 | 2.1219 | donor | |
| 4 | 3 | –9.2858 | 1 | 1 | 1 | ligand(P=O)···(HN)GLN340 | 2.3019 | donor | |
| 19 | 0 | –8.0713 | 1 | 1 | 1 | ligand[P=O]···(HN)GLN340 | 2.4743 | donor | |
| 0 | 0 | –7.7212 | 1 | 1 | 1 | ligand[P=O]···(HN)GLN340 | 2.3626 | donor | |
| 0 | 1 | –8.2572 | 1 | 1 | 1 | ligand(P=O)···(HN)GLN340 | 2.0139 | donor | |
| 0 | 11 | –8.3254 | 1 | 1 | 1 | ligand(P=O)···(HN)GLN340 | 1.9604 | donor | |
| 0 | 1 | –8.4110 | 1 | 1 | 1 | ligand(P=O)···(HN)GLN340 | 2.3885 | donor |
Potential Protein–Ligand Interactions of 5a–j with Chain A of Protein 4M7E at TYR597 Amino Acid Residuea
Docking poses of 5a–j, TYR597 in chain A of 4M7E protein and chain A of 4M7E protein (in order—top left to bottom right).